Hb_000156_160

Information

Type -
Description -
Location Contig156: 124329-128803
Sequence    

Annotation

kegg
ID cit:102620030
description urease accessory protein G-like
nr
ID XP_012072091.1
description PREDICTED: urease accessory protein G [Jatropha curcas]
swissprot
ID O64700
description Urease accessory protein G OS=Arabidopsis thaliana GN=UREG PE=2 SV=1
trembl
ID A0A067L1H1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04602 PE=3 SV=1
Gene Ontology
ID GO:0016020
description urease accessory protein g

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_13543: 124476-128719 , PASA_asmbl_13544: 124484-128727 , PASA_asmbl_13545: 124547-124846
cDNA
(Sanger)
(ID:Location)		 050_K04.ab1: 124477-125128

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000156_160 0.0 - - PREDICTED: urease accessory protein G [Jatropha curcas]
2 Hb_002092_100 0.0716702443 - - PREDICTED: actin-related protein 4-like [Jatropha curcas]
3 Hb_005288_080 0.0826800199 - - conserved hypothetical protein [Ricinus communis]
4 Hb_000922_020 0.0849692389 - - protein binding protein, putative [Ricinus communis]
5 Hb_016734_090 0.0875030255 - - PREDICTED: ATPase family AAA domain-containing protein 3-like [Jatropha curcas]
6 Hb_000661_020 0.091386804 - - BnaC08g27190D [Brassica napus]
7 Hb_011918_050 0.0942107726 - - -
8 Hb_000077_010 0.0982850362 - - unnamed protein product [Vitis vinifera]
9 Hb_004079_120 0.0988408908 - - PREDICTED: splicing factor, arginine/serine-rich 19 [Jatropha curcas]
10 Hb_002739_130 0.0999925714 - - PREDICTED: pre-mRNA-splicing factor 38B-like [Populus euphratica]
11 Hb_003849_040 0.1017856555 - - PREDICTED: serine/threonine-protein kinase AFC2-like [Jatropha curcas]
12 Hb_003638_010 0.1026349436 transcription factor TF Family: ARID PREDICTED: lysine-specific demethylase 5B isoform X2 [Jatropha curcas]
13 Hb_007929_080 0.1026556821 - - PREDICTED: transforming growth factor-beta receptor-associated protein 1 [Jatropha curcas]
14 Hb_001405_190 0.1039137386 - - PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 1, mitochondrial [Jatropha curcas]
15 Hb_000023_320 0.1042146472 - - conserved hypothetical protein [Ricinus communis]
16 Hb_002311_310 0.1052754237 - - PREDICTED: uncharacterized protein LOC100246622 [Vitis vinifera]
17 Hb_000922_140 0.1055290546 - - PREDICTED: peroxisomal membrane protein PEX14 [Jatropha curcas]
18 Hb_002571_030 0.1058975182 - - PREDICTED: microfibrillar-associated protein 1-like [Prunus mume]
19 Hb_006573_160 0.1070591356 - - PREDICTED: dnaJ protein ERDJ2A-like [Jatropha curcas]
20 Hb_000085_140 0.1112493044 transcription factor TF Family: PHD PREDICTED: uncharacterized protein LOC105633025 [Jatropha curcas]

Gene co-expression network

sample Hb_000156_160 Hb_000156_160 Hb_002092_100 Hb_002092_100 Hb_000156_160--Hb_002092_100 Hb_005288_080 Hb_005288_080 Hb_000156_160--Hb_005288_080 Hb_000922_020 Hb_000922_020 Hb_000156_160--Hb_000922_020 Hb_016734_090 Hb_016734_090 Hb_000156_160--Hb_016734_090 Hb_000661_020 Hb_000661_020 Hb_000156_160--Hb_000661_020 Hb_011918_050 Hb_011918_050 Hb_000156_160--Hb_011918_050 Hb_005053_010 Hb_005053_010 Hb_002092_100--Hb_005053_010 Hb_002805_060 Hb_002805_060 Hb_002092_100--Hb_002805_060 Hb_027380_030 Hb_027380_030 Hb_002092_100--Hb_027380_030 Hb_002092_100--Hb_016734_090 Hb_002681_170 Hb_002681_170 Hb_002092_100--Hb_002681_170 Hb_005288_080--Hb_000922_020 Hb_000525_100 Hb_000525_100 Hb_005288_080--Hb_000525_100 Hb_000679_340 Hb_000679_340 Hb_005288_080--Hb_000679_340 Hb_000264_070 Hb_000264_070 Hb_005288_080--Hb_000264_070 Hb_001077_030 Hb_001077_030 Hb_005288_080--Hb_001077_030 Hb_001405_190 Hb_001405_190 Hb_000922_020--Hb_001405_190 Hb_000922_020--Hb_000679_340 Hb_022256_060 Hb_022256_060 Hb_000922_020--Hb_022256_060 Hb_032202_080 Hb_032202_080 Hb_000922_020--Hb_032202_080 Hb_000922_020--Hb_001077_030 Hb_002739_130 Hb_002739_130 Hb_016734_090--Hb_002739_130 Hb_016734_090--Hb_011918_050 Hb_006452_160 Hb_006452_160 Hb_016734_090--Hb_006452_160 Hb_001269_200 Hb_001269_200 Hb_016734_090--Hb_001269_200 Hb_000563_330 Hb_000563_330 Hb_016734_090--Hb_000563_330 Hb_016734_090--Hb_000661_020 Hb_003929_140 Hb_003929_140 Hb_000661_020--Hb_003929_140 Hb_004631_190 Hb_004631_190 Hb_000661_020--Hb_004631_190 Hb_000661_020--Hb_002739_130 Hb_000661_020--Hb_000922_020 Hb_007929_080 Hb_007929_080 Hb_000661_020--Hb_007929_080 Hb_011918_050--Hb_002739_130 Hb_011918_050--Hb_001269_200 Hb_000023_320 Hb_000023_320 Hb_011918_050--Hb_000023_320 Hb_011918_050--Hb_005288_080 Hb_005054_190 Hb_005054_190 Hb_011918_050--Hb_005054_190
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
111.635 79.6135 121.195 50.2472 114.381 72.4297
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
39.2304 23.1844 20.3122 43.0867 77.1163

CAGE analysis