Hb_000331_530

Information

Type -
Description -
Location Contig331: 433427-441905
Sequence    

Annotation

kegg
ID rcu:RCOM_1507480
description transferase, transferring glycosyl groups, putative (EC:2.4.1.34)
nr
ID XP_012079918.1
description PREDICTED: callose synthase 10 isoform X1 [Jatropha curcas]
swissprot
ID Q9SJM0
description Callose synthase 10 OS=Arabidopsis thaliana GN=CALS10 PE=2 SV=5
trembl
ID V4TIS1
description Uncharacterized protein (Fragment) OS=Citrus clementina GN=CICLE_v100184561mg PE=4 SV=1
Gene Ontology
ID GO:0005794
description callose synthase 10

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000331_530 0.0 - - PREDICTED: callose synthase 10 isoform X1 [Jatropha curcas]
2 Hb_001777_030 0.1901090883 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g61370 [Jatropha curcas]
3 Hb_000538_250 0.2000095952 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g07650 [Jatropha curcas]
4 Hb_006106_010 0.2106135094 transcription factor TF Family: TCP transcription factor, putative [Ricinus communis]
5 Hb_000429_240 0.2138109268 - - PREDICTED: uncharacterized protein LOC105645185 isoform X1 [Jatropha curcas]
6 Hb_000086_540 0.214228281 - - -
7 Hb_006188_020 0.2192291787 - - PREDICTED: uncharacterized protein LOC105646403 [Jatropha curcas]
8 Hb_002030_020 0.2205173117 transcription factor TF Family: zf-HD PREDICTED: zinc-finger homeodomain protein 2-like [Jatropha curcas]
9 Hb_003175_060 0.2216752082 - - PREDICTED: uncharacterized protein LOC105649287 [Jatropha curcas]
10 Hb_101133_040 0.2257013637 - - PREDICTED: nudix hydrolase 18, mitochondrial-like [Jatropha curcas]
11 Hb_002046_130 0.2260635383 - - PREDICTED: UDP-sugar transporter sqv-7-like [Jatropha curcas]
12 Hb_000343_050 0.2273478881 - - conserved hypothetical protein [Ricinus communis]
13 Hb_005227_030 0.2284212684 - - PREDICTED: peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic [Jatropha curcas]
14 Hb_135714_010 0.2327862183 - - hypothetical protein POPTR_0017s09310g, partial [Populus trichocarpa]
15 Hb_005890_010 0.2337576852 - - PREDICTED: root phototropism protein 2 [Jatropha curcas]
16 Hb_005888_050 0.2368149286 - - ATP binding protein, putative [Ricinus communis]
17 Hb_011918_030 0.2386322042 - - PREDICTED: nudix hydrolase 4 [Jatropha curcas]
18 Hb_074966_010 0.2398155743 - - anthocyanidin 3-O-glucosyltransferase [Hevea brasiliensis]
19 Hb_001677_170 0.2418723579 - - hypothetical protein M569_03661, partial [Genlisea aurea]
20 Hb_001366_390 0.2423726561 - - PREDICTED: uncharacterized protein LOC105642722 [Jatropha curcas]

Gene co-expression network

sample Hb_000331_530 Hb_000331_530 Hb_001777_030 Hb_001777_030 Hb_000331_530--Hb_001777_030 Hb_000538_250 Hb_000538_250 Hb_000331_530--Hb_000538_250 Hb_006106_010 Hb_006106_010 Hb_000331_530--Hb_006106_010 Hb_000429_240 Hb_000429_240 Hb_000331_530--Hb_000429_240 Hb_000086_540 Hb_000086_540 Hb_000331_530--Hb_000086_540 Hb_006188_020 Hb_006188_020 Hb_000331_530--Hb_006188_020 Hb_003767_060 Hb_003767_060 Hb_001777_030--Hb_003767_060 Hb_002818_160 Hb_002818_160 Hb_001777_030--Hb_002818_160 Hb_000167_100 Hb_000167_100 Hb_001777_030--Hb_000167_100 Hb_001777_030--Hb_006106_010 Hb_000031_320 Hb_000031_320 Hb_001777_030--Hb_000031_320 Hb_000186_180 Hb_000186_180 Hb_001777_030--Hb_000186_180 Hb_000212_270 Hb_000212_270 Hb_000538_250--Hb_000212_270 Hb_003337_020 Hb_003337_020 Hb_000538_250--Hb_003337_020 Hb_007576_130 Hb_007576_130 Hb_000538_250--Hb_007576_130 Hb_002890_160 Hb_002890_160 Hb_000538_250--Hb_002890_160 Hb_000345_400 Hb_000345_400 Hb_000538_250--Hb_000345_400 Hb_000265_170 Hb_000265_170 Hb_000538_250--Hb_000265_170 Hb_006106_010--Hb_003767_060 Hb_002010_030 Hb_002010_030 Hb_006106_010--Hb_002010_030 Hb_004109_140 Hb_004109_140 Hb_006106_010--Hb_004109_140 Hb_001369_340 Hb_001369_340 Hb_006106_010--Hb_001369_340 Hb_000483_470 Hb_000483_470 Hb_006106_010--Hb_000483_470 Hb_005433_020 Hb_005433_020 Hb_006106_010--Hb_005433_020 Hb_115962_010 Hb_115962_010 Hb_000429_240--Hb_115962_010 Hb_000059_030 Hb_000059_030 Hb_000429_240--Hb_000059_030 Hb_000438_200 Hb_000438_200 Hb_000429_240--Hb_000438_200 Hb_000035_140 Hb_000035_140 Hb_000429_240--Hb_000035_140 Hb_000049_030 Hb_000049_030 Hb_000429_240--Hb_000049_030 Hb_001913_070 Hb_001913_070 Hb_000429_240--Hb_001913_070 Hb_001545_010 Hb_001545_010 Hb_000086_540--Hb_001545_010 Hb_000007_030 Hb_000007_030 Hb_000086_540--Hb_000007_030 Hb_000608_150 Hb_000608_150 Hb_000086_540--Hb_000608_150 Hb_000086_540--Hb_001777_030 Hb_005063_060 Hb_005063_060 Hb_000086_540--Hb_005063_060 Hb_111997_010 Hb_111997_010 Hb_006188_020--Hb_111997_010 Hb_074966_010 Hb_074966_010 Hb_006188_020--Hb_074966_010 Hb_000343_050 Hb_000343_050 Hb_006188_020--Hb_000343_050 Hb_001677_170 Hb_001677_170 Hb_006188_020--Hb_001677_170 Hb_001926_020 Hb_001926_020 Hb_006188_020--Hb_001926_020 Hb_005888_050 Hb_005888_050 Hb_006188_020--Hb_005888_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.158409 0.414582 0.0946041 0 0.0860566
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.241533

CAGE analysis