Hb_000429_240

Information

Type -
Description -
Location Contig429: 320167-321212
Sequence    

Annotation

kegg
ID rcu:RCOM_0089480
description hypothetical protein
nr
ID XP_012086104.1
description PREDICTED: uncharacterized protein LOC105645185 isoform X1 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067K2H5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21047 PE=4 SV=1
Gene Ontology
ID GO:0005488
description dentin sialophospho

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000429_240 0.0 - - PREDICTED: uncharacterized protein LOC105645185 isoform X1 [Jatropha curcas]
2 Hb_115962_010 0.128748 - - receptor serine/threonine kinase, putative [Ricinus communis]
3 Hb_000059_030 0.1439724749 - - PREDICTED: chaperone protein dnaJ 10 [Jatropha curcas]
4 Hb_000438_200 0.1478483475 - - PREDICTED: protein NRT1/ PTR FAMILY 5.1 [Jatropha curcas]
5 Hb_000035_140 0.1555249453 transcription factor TF Family: WRKY putative WRKY transcription factor family protein [Populus trichocarpa]
6 Hb_000049_030 0.1574917653 - - conserved hypothetical protein [Ricinus communis]
7 Hb_001913_070 0.160690345 - - PREDICTED: caffeoylshikimate esterase-like [Jatropha curcas]
8 Hb_011918_030 0.1607523482 - - PREDICTED: nudix hydrolase 4 [Jatropha curcas]
9 Hb_001025_140 0.1609225017 - - hypothetical protein POPTR_0015s09180g [Populus trichocarpa]
10 Hb_009421_090 0.1650043578 - - PREDICTED: uncharacterized protein LOC105639694 [Jatropha curcas]
11 Hb_014700_020 0.1669664489 - - tryptophan synthase beta chain, putative [Ricinus communis]
12 Hb_007919_070 0.1677367858 - - hypothetical protein POPTR_0005s28110g [Populus trichocarpa]
13 Hb_000349_170 0.1677941715 - - PREDICTED: geraniol 8-hydroxylase-like [Jatropha curcas]
14 Hb_000140_250 0.1685768398 - - Late embryogenesis abundant protein Lea14-A, putative [Ricinus communis]
15 Hb_000251_170 0.1720841424 - - leucine-rich repeat transmembrane protein kinase, putative [Ricinus communis]
16 Hb_059429_010 0.1720878158 - - PREDICTED: root phototropism protein 2 [Jatropha curcas]
17 Hb_001983_040 0.1733385688 - - PREDICTED: uncharacterized protein LOC105644022 [Jatropha curcas]
18 Hb_012496_020 0.1738933368 - - receptor serine/threonine kinase, putative [Ricinus communis]
19 Hb_010422_020 0.1759040766 transcription factor TF Family: zf-HD PREDICTED: zinc-finger homeodomain protein 2-like [Jatropha curcas]
20 Hb_155896_010 0.1784463247 - - PREDICTED: receptor protein kinase CLAVATA1 [Jatropha curcas]

Gene co-expression network

sample Hb_000429_240 Hb_000429_240 Hb_115962_010 Hb_115962_010 Hb_000429_240--Hb_115962_010 Hb_000059_030 Hb_000059_030 Hb_000429_240--Hb_000059_030 Hb_000438_200 Hb_000438_200 Hb_000429_240--Hb_000438_200 Hb_000035_140 Hb_000035_140 Hb_000429_240--Hb_000035_140 Hb_000049_030 Hb_000049_030 Hb_000429_240--Hb_000049_030 Hb_001913_070 Hb_001913_070 Hb_000429_240--Hb_001913_070 Hb_115962_010--Hb_000438_200 Hb_115962_010--Hb_000049_030 Hb_115962_010--Hb_000035_140 Hb_012496_020 Hb_012496_020 Hb_115962_010--Hb_012496_020 Hb_009421_090 Hb_009421_090 Hb_115962_010--Hb_009421_090 Hb_001025_140 Hb_001025_140 Hb_115962_010--Hb_001025_140 Hb_000059_030--Hb_001025_140 Hb_000392_170 Hb_000392_170 Hb_000059_030--Hb_000392_170 Hb_000059_030--Hb_000438_200 Hb_000856_230 Hb_000856_230 Hb_000059_030--Hb_000856_230 Hb_000059_030--Hb_115962_010 Hb_000059_030--Hb_009421_090 Hb_018563_010 Hb_018563_010 Hb_000438_200--Hb_018563_010 Hb_000438_200--Hb_000049_030 Hb_000438_200--Hb_012496_020 Hb_167206_010 Hb_167206_010 Hb_000438_200--Hb_167206_010 Hb_000438_200--Hb_001025_140 Hb_001660_080 Hb_001660_080 Hb_000035_140--Hb_001660_080 Hb_189208_060 Hb_189208_060 Hb_000035_140--Hb_189208_060 Hb_001160_050 Hb_001160_050 Hb_000035_140--Hb_001160_050 Hb_004551_010 Hb_004551_010 Hb_000035_140--Hb_004551_010 Hb_000035_140--Hb_012496_020 Hb_059429_010 Hb_059429_010 Hb_000049_030--Hb_059429_010 Hb_059318_010 Hb_059318_010 Hb_000049_030--Hb_059318_010 Hb_001983_040 Hb_001983_040 Hb_000049_030--Hb_001983_040 Hb_029262_010 Hb_029262_010 Hb_000049_030--Hb_029262_010 Hb_010422_020 Hb_010422_020 Hb_001913_070--Hb_010422_020 Hb_104014_010 Hb_104014_010 Hb_001913_070--Hb_104014_010 Hb_001913_070--Hb_001983_040 Hb_149985_030 Hb_149985_030 Hb_001913_070--Hb_149985_030 Hb_000809_220 Hb_000809_220 Hb_001913_070--Hb_000809_220 Hb_000349_170 Hb_000349_170 Hb_001913_070--Hb_000349_170
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 1.01026 3.17734 0.689889 0 0.141535
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.552111

CAGE analysis