Hb_000059_030

Information

Type -
Description -
Location Contig59: 26888-30123
Sequence    

Annotation

kegg
ID rcu:RCOM_0559610
description Chaperone protein dnaJ, putative
nr
ID XP_012066113.1
description PREDICTED: chaperone protein dnaJ 10 [Jatropha curcas]
swissprot
ID Q8GYX8
description Chaperone protein dnaJ 10 OS=Arabidopsis thaliana GN=ATJ10 PE=2 SV=2
trembl
ID A0A067L3S6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25268 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_50156: 28056-28492
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000059_030 0.0 - - PREDICTED: chaperone protein dnaJ 10 [Jatropha curcas]
2 Hb_001025_140 0.1103619876 - - hypothetical protein POPTR_0015s09180g [Populus trichocarpa]
3 Hb_000392_170 0.1167909717 - - PREDICTED: protein PHYTOCHROME KINASE SUBSTRATE 3 [Jatropha curcas]
4 Hb_000438_200 0.1186405203 - - PREDICTED: protein NRT1/ PTR FAMILY 5.1 [Jatropha curcas]
5 Hb_000856_230 0.1188454326 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase FEI 2 [Jatropha curcas]
6 Hb_115962_010 0.1293365259 - - receptor serine/threonine kinase, putative [Ricinus communis]
7 Hb_009421_090 0.1300267676 - - PREDICTED: uncharacterized protein LOC105639694 [Jatropha curcas]
8 Hb_004316_020 0.1306884286 - - PREDICTED: mitogen-activated protein kinase kinase kinase NPK1-like [Jatropha curcas]
9 Hb_004712_090 0.1340167069 - - Serine acetyltransferase 3, mitochondrial precursor, putative [Ricinus communis]
10 Hb_000256_180 0.1351492314 - - PREDICTED: uncharacterized protein LOC105637589 [Jatropha curcas]
11 Hb_000134_260 0.14018161 transcription factor TF Family: bHLH DNA binding protein, putative [Ricinus communis]
12 Hb_009252_090 0.142006469 transcription factor TF Family: bHLH DNA binding protein, putative [Ricinus communis]
13 Hb_014700_020 0.1433892523 - - tryptophan synthase beta chain, putative [Ricinus communis]
14 Hb_000429_240 0.1439724749 - - PREDICTED: uncharacterized protein LOC105645185 isoform X1 [Jatropha curcas]
15 Hb_011918_030 0.1538023377 - - PREDICTED: nudix hydrolase 4 [Jatropha curcas]
16 Hb_001638_120 0.1550357457 - - PREDICTED: CBL-interacting serine/threonine-protein kinase 9 [Jatropha curcas]
17 Hb_000049_030 0.1557564097 - - conserved hypothetical protein [Ricinus communis]
18 Hb_004223_080 0.1586178879 transcription factor TF Family: C2H2 nucleic acid binding protein, putative [Ricinus communis]
19 Hb_007919_070 0.1587929226 - - hypothetical protein POPTR_0005s28110g [Populus trichocarpa]
20 Hb_000035_140 0.1593495894 transcription factor TF Family: WRKY putative WRKY transcription factor family protein [Populus trichocarpa]

Gene co-expression network

sample Hb_000059_030 Hb_000059_030 Hb_001025_140 Hb_001025_140 Hb_000059_030--Hb_001025_140 Hb_000392_170 Hb_000392_170 Hb_000059_030--Hb_000392_170 Hb_000438_200 Hb_000438_200 Hb_000059_030--Hb_000438_200 Hb_000856_230 Hb_000856_230 Hb_000059_030--Hb_000856_230 Hb_115962_010 Hb_115962_010 Hb_000059_030--Hb_115962_010 Hb_009421_090 Hb_009421_090 Hb_000059_030--Hb_009421_090 Hb_004223_080 Hb_004223_080 Hb_001025_140--Hb_004223_080 Hb_001025_140--Hb_000438_200 Hb_001025_140--Hb_115962_010 Hb_001638_120 Hb_001638_120 Hb_001025_140--Hb_001638_120 Hb_000049_030 Hb_000049_030 Hb_001025_140--Hb_000049_030 Hb_004316_020 Hb_004316_020 Hb_000392_170--Hb_004316_020 Hb_002311_500 Hb_002311_500 Hb_000392_170--Hb_002311_500 Hb_002200_020 Hb_002200_020 Hb_000392_170--Hb_002200_020 Hb_000392_170--Hb_004223_080 Hb_000392_170--Hb_000856_230 Hb_000200_270 Hb_000200_270 Hb_000392_170--Hb_000200_270 Hb_000438_200--Hb_115962_010 Hb_018563_010 Hb_018563_010 Hb_000438_200--Hb_018563_010 Hb_000438_200--Hb_000049_030 Hb_012496_020 Hb_012496_020 Hb_000438_200--Hb_012496_020 Hb_167206_010 Hb_167206_010 Hb_000438_200--Hb_167206_010 Hb_000856_230--Hb_009421_090 Hb_014700_020 Hb_014700_020 Hb_000856_230--Hb_014700_020 Hb_000856_230--Hb_000200_270 Hb_002540_100 Hb_002540_100 Hb_000856_230--Hb_002540_100 Hb_000856_230--Hb_004316_020 Hb_000371_030 Hb_000371_030 Hb_000856_230--Hb_000371_030 Hb_115962_010--Hb_000049_030 Hb_000035_140 Hb_000035_140 Hb_115962_010--Hb_000035_140 Hb_115962_010--Hb_012496_020 Hb_115962_010--Hb_009421_090 Hb_009421_090--Hb_014700_020 Hb_009421_090--Hb_000200_270 Hb_003767_030 Hb_003767_030 Hb_009421_090--Hb_003767_030 Hb_003207_210 Hb_003207_210 Hb_009421_090--Hb_003207_210
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.952197 2.79214 0.993347 0.0348925 0.05165
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0397384 0 0 0.0250362 0.323773

CAGE analysis