Hb_000258_040

Information

Type -
Description -
Location Contig258: 14854-19125
Sequence    

Annotation

kegg
ID rcu:RCOM_1057500
description protein kinase atsik, putative
nr
ID XP_012091054.1
description PREDICTED: probable receptor-like protein kinase At3g55450 [Jatropha curcas]
swissprot
ID Q9LFP7
description Probable receptor-like protein kinase At5g15080 OS=Arabidopsis thaliana GN=At5g15080 PE=2 SV=1
trembl
ID A0A067JDD8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00658 PE=4 SV=1
Gene Ontology
ID GO:0004672
description probable receptor-like protein kinase at3g55450

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000258_040 0.0 - - PREDICTED: probable receptor-like protein kinase At3g55450 [Jatropha curcas]
2 Hb_001347_050 0.1076478078 - - serine/threonine protein kinase, putative [Ricinus communis]
3 Hb_004055_050 0.112522262 - - PREDICTED: coatomer subunit zeta-1-like [Jatropha curcas]
4 Hb_000679_100 0.1126468678 - - PREDICTED: probable sugar phosphate/phosphate translocator At5g25400 isoform X1 [Jatropha curcas]
5 Hb_007919_110 0.1163745415 - - PREDICTED: UDP-galactose transporter 2-like [Jatropha curcas]
6 Hb_000085_260 0.1175280543 - - glycerophosphoryl diester phosphodiesterase, putative [Ricinus communis]
7 Hb_010672_020 0.1181779805 - - PREDICTED: ATP synthase gamma chain, chloroplastic-like [Jatropha curcas]
8 Hb_005535_080 0.1207826702 - - hypothetical protein CICLE_v10012766mg [Citrus clementina]
9 Hb_003209_130 0.1209738357 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710 [Jatropha curcas]
10 Hb_000395_040 0.1220995254 - - PREDICTED: uncharacterized protein LOC105645576 [Jatropha curcas]
11 Hb_000503_020 0.1226526111 - - PREDICTED: calcium-dependent protein kinase 13 [Jatropha curcas]
12 Hb_000665_170 0.1226718477 - - PREDICTED: probable beta-1,3-galactosyltransferase 10 [Jatropha curcas]
13 Hb_006120_050 0.1236856272 - - PREDICTED: importin subunit alpha-4-like [Jatropha curcas]
14 Hb_011310_110 0.1238117105 - - PREDICTED: probable sugar phosphate/phosphate translocator At5g25400 isoform X1 [Jatropha curcas]
15 Hb_084513_010 0.1243157099 - - PREDICTED: structural maintenance of chromosomes protein 5 [Jatropha curcas]
16 Hb_000023_300 0.1246730467 - - Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis]
17 Hb_000753_160 0.1247257922 - - PREDICTED: uncharacterized protein LOC105640669 [Jatropha curcas]
18 Hb_002304_050 0.1247941754 - - pyruvate kinase, putative [Ricinus communis]
19 Hb_000890_030 0.1248299835 - - plastid CUL1 [Hevea brasiliensis]
20 Hb_001250_050 0.1250768016 - - PREDICTED: uncharacterized protein LOC105644623 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_000258_040 Hb_000258_040 Hb_001347_050 Hb_001347_050 Hb_000258_040--Hb_001347_050 Hb_004055_050 Hb_004055_050 Hb_000258_040--Hb_004055_050 Hb_000679_100 Hb_000679_100 Hb_000258_040--Hb_000679_100 Hb_007919_110 Hb_007919_110 Hb_000258_040--Hb_007919_110 Hb_000085_260 Hb_000085_260 Hb_000258_040--Hb_000085_260 Hb_010672_020 Hb_010672_020 Hb_000258_040--Hb_010672_020 Hb_001347_050--Hb_000679_100 Hb_000193_300 Hb_000193_300 Hb_001347_050--Hb_000193_300 Hb_003209_130 Hb_003209_130 Hb_001347_050--Hb_003209_130 Hb_000138_060 Hb_000138_060 Hb_001347_050--Hb_000138_060 Hb_001347_050--Hb_000085_260 Hb_000622_110 Hb_000622_110 Hb_004055_050--Hb_000622_110 Hb_001250_050 Hb_001250_050 Hb_004055_050--Hb_001250_050 Hb_005535_080 Hb_005535_080 Hb_004055_050--Hb_005535_080 Hb_081599_010 Hb_081599_010 Hb_004055_050--Hb_081599_010 Hb_003777_030 Hb_003777_030 Hb_004055_050--Hb_003777_030 Hb_000665_170 Hb_000665_170 Hb_004055_050--Hb_000665_170 Hb_000679_100--Hb_000085_260 Hb_001097_040 Hb_001097_040 Hb_000679_100--Hb_001097_040 Hb_007286_020 Hb_007286_020 Hb_000679_100--Hb_007286_020 Hb_001051_070 Hb_001051_070 Hb_000679_100--Hb_001051_070 Hb_000023_300 Hb_000023_300 Hb_000679_100--Hb_000023_300 Hb_010042_030 Hb_010042_030 Hb_000679_100--Hb_010042_030 Hb_003449_100 Hb_003449_100 Hb_007919_110--Hb_003449_100 Hb_000753_160 Hb_000753_160 Hb_007919_110--Hb_000753_160 Hb_002272_240 Hb_002272_240 Hb_007919_110--Hb_002272_240 Hb_012760_030 Hb_012760_030 Hb_007919_110--Hb_012760_030 Hb_007919_110--Hb_003209_130 Hb_006120_050 Hb_006120_050 Hb_007919_110--Hb_006120_050 Hb_001159_030 Hb_001159_030 Hb_000085_260--Hb_001159_030 Hb_000085_260--Hb_010042_030 Hb_005062_110 Hb_005062_110 Hb_000085_260--Hb_005062_110 Hb_000098_050 Hb_000098_050 Hb_000085_260--Hb_000098_050 Hb_000503_020 Hb_000503_020 Hb_000085_260--Hb_000503_020 Hb_011310_110 Hb_011310_110 Hb_010672_020--Hb_011310_110 Hb_000705_230 Hb_000705_230 Hb_010672_020--Hb_000705_230 Hb_010672_020--Hb_000665_170 Hb_000395_110 Hb_000395_110 Hb_010672_020--Hb_000395_110 Hb_007545_010 Hb_007545_010 Hb_010672_020--Hb_007545_010 Hb_010672_020--Hb_006120_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
8.54668 10.8431 14.2067 21.7754 2.4195 5.79906
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.00966 3.47215 5.00883 9.09379 7.31428

CAGE analysis