Hb_000211_100

Information

Type -
Description -
Location Contig211: 145945-151414
Sequence    

Annotation

kegg
ID rcu:RCOM_0574610
description biotin synthase, putative (EC:2.8.1.6)
nr
ID XP_012066183.1
description PREDICTED: biotin synthase [Jatropha curcas]
swissprot
ID P54967
description Biotin synthase OS=Arabidopsis thaliana GN=BIO2 PE=2 SV=1
trembl
ID A0A067LE92
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23762 PE=3 SV=1
Gene Ontology
ID GO:0004076
description biotin synthase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_21838: 145613-151338
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000211_100 0.0 - - PREDICTED: biotin synthase [Jatropha curcas]
2 Hb_011386_050 0.1213747644 - - PREDICTED: malonyl-CoA-acyl carrier protein transacylase, mitochondrial [Jatropha curcas]
3 Hb_005784_070 0.1259321179 - - PREDICTED: protein TONSOKU isoform X2 [Jatropha curcas]
4 Hb_010080_010 0.1271464284 - - PREDICTED: uncharacterized protein LOC105635247 [Jatropha curcas]
5 Hb_000098_150 0.1310252315 - - DNA helicase hus2, putative [Ricinus communis]
6 Hb_005901_030 0.1310639347 - - PREDICTED: phragmoplast orienting kinesin 2 isoform X1 [Jatropha curcas]
7 Hb_004957_020 0.1312625883 - - conserved hypothetical protein [Ricinus communis]
8 Hb_004712_190 0.1381337981 - - PREDICTED: uncharacterized protein LOC105633105 [Jatropha curcas]
9 Hb_003874_010 0.1426745549 transcription factor TF Family: B3 transcription factor, putative [Ricinus communis]
10 Hb_002913_010 0.1454702927 - - PREDICTED: mitochondrial amidoxime reducing component 2-like isoform X1 [Jatropha curcas]
11 Hb_005144_210 0.1459892376 - - conserved hypothetical protein [Ricinus communis]
12 Hb_001195_640 0.1492621879 - - PREDICTED: uncharacterized protein LOC105633747 [Jatropha curcas]
13 Hb_000345_290 0.1497928499 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
14 Hb_000120_250 0.1512250047 - - PREDICTED: uncharacterized protein LOC105630152 isoform X1 [Jatropha curcas]
15 Hb_000340_130 0.1512750025 - - PREDICTED: uncharacterized protein LOC105650033 isoform X1 [Jatropha curcas]
16 Hb_000940_050 0.1526791191 - - hypothetical protein JCGZ_19588 [Jatropha curcas]
17 Hb_004324_390 0.1534020654 - - PREDICTED: plastidial pyruvate kinase 2 [Jatropha curcas]
18 Hb_029388_010 0.1542361531 transcription factor TF Family: C2C2-CO-like PREDICTED: zinc finger protein CONSTANS-LIKE 15-like [Jatropha curcas]
19 Hb_004108_210 0.1556930771 - - phenazine biosynthesis protein, putative [Ricinus communis]
20 Hb_000331_420 0.1571940997 - - PREDICTED: nucleoside diphosphate kinase 2, chloroplastic [Jatropha curcas]

Gene co-expression network

sample Hb_000211_100 Hb_000211_100 Hb_011386_050 Hb_011386_050 Hb_000211_100--Hb_011386_050 Hb_005784_070 Hb_005784_070 Hb_000211_100--Hb_005784_070 Hb_010080_010 Hb_010080_010 Hb_000211_100--Hb_010080_010 Hb_000098_150 Hb_000098_150 Hb_000211_100--Hb_000098_150 Hb_005901_030 Hb_005901_030 Hb_000211_100--Hb_005901_030 Hb_004957_020 Hb_004957_020 Hb_000211_100--Hb_004957_020 Hb_004994_080 Hb_004994_080 Hb_011386_050--Hb_004994_080 Hb_000340_130 Hb_000340_130 Hb_011386_050--Hb_000340_130 Hb_002027_320 Hb_002027_320 Hb_011386_050--Hb_002027_320 Hb_006555_040 Hb_006555_040 Hb_011386_050--Hb_006555_040 Hb_007263_010 Hb_007263_010 Hb_011386_050--Hb_007263_010 Hb_000364_100 Hb_000364_100 Hb_011386_050--Hb_000364_100 Hb_004032_160 Hb_004032_160 Hb_005784_070--Hb_004032_160 Hb_000913_030 Hb_000913_030 Hb_005784_070--Hb_000913_030 Hb_001053_190 Hb_001053_190 Hb_005784_070--Hb_001053_190 Hb_006120_040 Hb_006120_040 Hb_005784_070--Hb_006120_040 Hb_016448_010 Hb_016448_010 Hb_005784_070--Hb_016448_010 Hb_004712_190 Hb_004712_190 Hb_005784_070--Hb_004712_190 Hb_000120_250 Hb_000120_250 Hb_010080_010--Hb_000120_250 Hb_100790_010 Hb_100790_010 Hb_010080_010--Hb_100790_010 Hb_000975_240 Hb_000975_240 Hb_010080_010--Hb_000975_240 Hb_010080_010--Hb_011386_050 Hb_001277_280 Hb_001277_280 Hb_010080_010--Hb_001277_280 Hb_010080_010--Hb_000340_130 Hb_004108_210 Hb_004108_210 Hb_000098_150--Hb_004108_210 Hb_001863_160 Hb_001863_160 Hb_000098_150--Hb_001863_160 Hb_005144_210 Hb_005144_210 Hb_000098_150--Hb_005144_210 Hb_001221_580 Hb_001221_580 Hb_000098_150--Hb_001221_580 Hb_000098_150--Hb_004712_190 Hb_014231_020 Hb_014231_020 Hb_000098_150--Hb_014231_020 Hb_005901_030--Hb_004957_020 Hb_004155_020 Hb_004155_020 Hb_005901_030--Hb_004155_020 Hb_000260_650 Hb_000260_650 Hb_005901_030--Hb_000260_650 Hb_021495_010 Hb_021495_010 Hb_005901_030--Hb_021495_010 Hb_000640_050 Hb_000640_050 Hb_005901_030--Hb_000640_050 Hb_000959_190 Hb_000959_190 Hb_004957_020--Hb_000959_190 Hb_003430_040 Hb_003430_040 Hb_004957_020--Hb_003430_040 Hb_003874_010 Hb_003874_010 Hb_004957_020--Hb_003874_010 Hb_000345_290 Hb_000345_290 Hb_004957_020--Hb_000345_290
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
11.0168 7.46132 44.0846 11.7403 4.2091 5.67361
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
8.67994 5.45668 4.41311 12.8994 7.39716

CAGE analysis