Hb_004994_080

Information

Type -
Description -
Location Contig4994: 52064-58211
Sequence    

Annotation

kegg
ID rcu:RCOM_1614410
description cell division protein ftsy, putative
nr
ID XP_012083458.1
description PREDICTED: cell division protein FtsY homolog, chloroplastic isoform X1 [Jatropha curcas]
swissprot
ID O80842
description Cell division protein FtsY homolog, chloroplastic OS=Arabidopsis thaliana GN=CPFTSY PE=1 SV=2
trembl
ID A0A067K8T0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14446 PE=4 SV=1
Gene Ontology
ID GO:0005622
description cell division protein chloroplastic

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_45622: 52936-53631 , PASA_asmbl_45623: 52055-58220 , PASA_asmbl_45624: 57354-57575 , PASA_asmbl_45625: 52159-58155
cDNA
(Sanger)
(ID:Location)		 023_P19.ab1: 52055-53053 , 030_E09.ab1: 52848-57898

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004994_080 0.0 - - PREDICTED: cell division protein FtsY homolog, chloroplastic isoform X1 [Jatropha curcas]
2 Hb_007263_010 0.0713094509 - - PREDICTED: clustered mitochondria protein homolog [Jatropha curcas]
3 Hb_000364_100 0.0775190027 - - PREDICTED: uncharacterized protein LOC105639739 [Jatropha curcas]
4 Hb_000181_060 0.0780088084 - - PREDICTED: 30S ribosomal protein S20, chloroplastic [Jatropha curcas]
5 Hb_011386_050 0.0794119722 - - PREDICTED: malonyl-CoA-acyl carrier protein transacylase, mitochondrial [Jatropha curcas]
6 Hb_005162_110 0.079519902 - - PREDICTED: uncharacterized protein LOC105648430 [Jatropha curcas]
7 Hb_006555_040 0.0797155604 - - PREDICTED: uncharacterized protein LOC105639405 [Jatropha curcas]
8 Hb_000284_130 0.0812984921 - - sodium-bile acid cotransporter, putative [Ricinus communis]
9 Hb_007451_040 0.084112423 - - PREDICTED: uncharacterized protein LOC105643411 [Jatropha curcas]
10 Hb_015292_040 0.0897404028 - - PREDICTED: myb-like protein X [Jatropha curcas]
11 Hb_002027_320 0.0897696744 - - PREDICTED: RNA-binding protein BRN1 [Jatropha curcas]
12 Hb_000140_440 0.092215147 - - PREDICTED: probable hydroxyacylglutathione hydrolase 2, chloroplast [Jatropha curcas]
13 Hb_000663_020 0.0970749711 - - PREDICTED: alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitochondrial isoform X1 [Jatropha curcas]
14 Hb_003752_070 0.0971785119 - - PREDICTED: uncharacterized protein LOC105643912 isoform X1 [Jatropha curcas]
15 Hb_021650_010 0.0973302828 - - hypothetical protein JCGZ_09648 [Jatropha curcas]
16 Hb_002218_020 0.0973650428 - - PREDICTED: AT-hook motif nuclear-localized protein 14 [Jatropha curcas]
17 Hb_001623_490 0.0988551605 - - PREDICTED: haloacid dehalogenase-like hydrolase domain-containing protein At2g33255 isoform X2 [Jatropha curcas]
18 Hb_001930_030 0.0989828675 - - PREDICTED: 30S ribosomal protein S10, chloroplastic [Jatropha curcas]
19 Hb_005731_110 0.1016890345 - - PREDICTED: uncharacterized protein LOC105108367 isoform X1 [Populus euphratica]
20 Hb_008375_030 0.1060721324 - - PREDICTED: carbon catabolite repressor protein 4 homolog 4 isoform X1 [Populus euphratica]

Gene co-expression network

sample Hb_004994_080 Hb_004994_080 Hb_007263_010 Hb_007263_010 Hb_004994_080--Hb_007263_010 Hb_000364_100 Hb_000364_100 Hb_004994_080--Hb_000364_100 Hb_000181_060 Hb_000181_060 Hb_004994_080--Hb_000181_060 Hb_011386_050 Hb_011386_050 Hb_004994_080--Hb_011386_050 Hb_005162_110 Hb_005162_110 Hb_004994_080--Hb_005162_110 Hb_006555_040 Hb_006555_040 Hb_004994_080--Hb_006555_040 Hb_007451_040 Hb_007451_040 Hb_007263_010--Hb_007451_040 Hb_002027_320 Hb_002027_320 Hb_007263_010--Hb_002027_320 Hb_000392_450 Hb_000392_450 Hb_007263_010--Hb_000392_450 Hb_007263_010--Hb_006555_040 Hb_007263_010--Hb_011386_050 Hb_000532_100 Hb_000532_100 Hb_000364_100--Hb_000532_100 Hb_000826_030 Hb_000826_030 Hb_000364_100--Hb_000826_030 Hb_001158_160 Hb_001158_160 Hb_000364_100--Hb_001158_160 Hb_000284_130 Hb_000284_130 Hb_000364_100--Hb_000284_130 Hb_000364_100--Hb_011386_050 Hb_000181_060--Hb_000284_130 Hb_000194_010 Hb_000194_010 Hb_000181_060--Hb_000194_010 Hb_000181_060--Hb_007263_010 Hb_000181_060--Hb_002027_320 Hb_001623_490 Hb_001623_490 Hb_000181_060--Hb_001623_490 Hb_000340_130 Hb_000340_130 Hb_011386_050--Hb_000340_130 Hb_011386_050--Hb_002027_320 Hb_011386_050--Hb_006555_040 Hb_005946_040 Hb_005946_040 Hb_005162_110--Hb_005946_040 Hb_021650_010 Hb_021650_010 Hb_005162_110--Hb_021650_010 Hb_000003_170 Hb_000003_170 Hb_005162_110--Hb_000003_170 Hb_005731_110 Hb_005731_110 Hb_005162_110--Hb_005731_110 Hb_000051_060 Hb_000051_060 Hb_005162_110--Hb_000051_060 Hb_003752_070 Hb_003752_070 Hb_005162_110--Hb_003752_070 Hb_000140_440 Hb_000140_440 Hb_006555_040--Hb_000140_440 Hb_001930_030 Hb_001930_030 Hb_006555_040--Hb_001930_030 Hb_002255_040 Hb_002255_040 Hb_006555_040--Hb_002255_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
7.90522 6.25934 32.2306 9.48281 7.84633 7.58255
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
7.02851 8.12456 3.3277 6.23335 15.4314

CAGE analysis