Hb_000532_100

Information

Type -
Description -
Location Contig532: 122633-126348
Sequence    

Annotation

kegg
ID rcu:RCOM_1686420
description glutathione-s-transferase theta, gst, putative (EC:2.5.1.18)
nr
ID XP_002509785.1
description glutathione-s-transferase theta, gst, putative [Ricinus communis]
swissprot
ID Q9ZRT5
description Glutathione S-transferase T1 OS=Arabidopsis thaliana GN=GSTT1 PE=2 SV=1
trembl
ID B9RCA1
description Glutathione-s-transferase theta, gst, putative OS=Ricinus communis GN=RCOM_1686420 PE=4 SV=1
Gene Ontology
ID GO:0004364
description glutathione s-transferase t1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_47406: 122631-126340 , PASA_asmbl_47409: 125180-125352
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000532_100 0.0 - - glutathione-s-transferase theta, gst, putative [Ricinus communis]
2 Hb_000364_100 0.0719236388 - - PREDICTED: uncharacterized protein LOC105639739 [Jatropha curcas]
3 Hb_010174_090 0.0894711681 - - PREDICTED: ALBINO3-like protein 1, chloroplastic [Jatropha curcas]
4 Hb_006569_040 0.1003669591 transcription factor TF Family: GNAT PREDICTED: uncharacterized protein LOC105650906 [Jatropha curcas]
5 Hb_005389_170 0.1046041111 - - PREDICTED: probable lactoylglutathione lyase, chloroplast isoform X1 [Jatropha curcas]
6 Hb_001930_030 0.1052031015 - - PREDICTED: 30S ribosomal protein S10, chloroplastic [Jatropha curcas]
7 Hb_000826_030 0.1052537924 - - PREDICTED: putative tRNA pseudouridine synthase isoform X1 [Jatropha curcas]
8 Hb_001158_160 0.1066965174 - - PREDICTED: RNA pseudouridine synthase 7 isoform X1 [Jatropha curcas]
9 Hb_000445_070 0.1133172993 - - PREDICTED: uncharacterized protein LOC105638998 [Jatropha curcas]
10 Hb_000284_130 0.1136180504 - - sodium-bile acid cotransporter, putative [Ricinus communis]
11 Hb_003529_140 0.1163001344 - - PREDICTED: nifU-like protein 2, chloroplastic [Jatropha curcas]
12 Hb_003752_070 0.1174727445 - - PREDICTED: uncharacterized protein LOC105643912 isoform X1 [Jatropha curcas]
13 Hb_000311_120 0.1201864733 - - PREDICTED: NADPH-dependent thioredoxin reductase 3 [Populus euphratica]
14 Hb_000331_130 0.120392139 transcription factor TF Family: Trihelix conserved hypothetical protein [Ricinus communis]
15 Hb_000300_180 0.1211554992 - - transcription initiation factor brf1, putative [Ricinus communis]
16 Hb_000640_160 0.1225635015 - - ATP-dependent Clp protease proteolytic subunit, putative [Ricinus communis]
17 Hb_000359_130 0.1227589876 - - 4-hydroxyphenylpyruvate dioxygenase [Hevea brasiliensis]
18 Hb_000245_150 0.1240495924 - - PREDICTED: ATP-dependent zinc metalloprotease FtsH [Jatropha curcas]
19 Hb_007283_010 0.1244558894 - - PREDICTED: pre-mRNA-processing protein 40C isoform X1 [Jatropha curcas]
20 Hb_000085_190 0.1251534091 - - FtsZ1 protein [Manihot esculenta]

Gene co-expression network

sample Hb_000532_100 Hb_000532_100 Hb_000364_100 Hb_000364_100 Hb_000532_100--Hb_000364_100 Hb_010174_090 Hb_010174_090 Hb_000532_100--Hb_010174_090 Hb_006569_040 Hb_006569_040 Hb_000532_100--Hb_006569_040 Hb_005389_170 Hb_005389_170 Hb_000532_100--Hb_005389_170 Hb_001930_030 Hb_001930_030 Hb_000532_100--Hb_001930_030 Hb_000826_030 Hb_000826_030 Hb_000532_100--Hb_000826_030 Hb_004994_080 Hb_004994_080 Hb_000364_100--Hb_004994_080 Hb_000364_100--Hb_000826_030 Hb_001158_160 Hb_001158_160 Hb_000364_100--Hb_001158_160 Hb_000284_130 Hb_000284_130 Hb_000364_100--Hb_000284_130 Hb_011386_050 Hb_011386_050 Hb_000364_100--Hb_011386_050 Hb_000311_120 Hb_000311_120 Hb_010174_090--Hb_000311_120 Hb_000613_120 Hb_000613_120 Hb_010174_090--Hb_000613_120 Hb_006787_090 Hb_006787_090 Hb_010174_090--Hb_006787_090 Hb_003529_140 Hb_003529_140 Hb_010174_090--Hb_003529_140 Hb_010174_090--Hb_006569_040 Hb_010174_090--Hb_000826_030 Hb_006569_040--Hb_003529_140 Hb_007283_010 Hb_007283_010 Hb_006569_040--Hb_007283_010 Hb_006569_040--Hb_000826_030 Hb_000663_020 Hb_000663_020 Hb_006569_040--Hb_000663_020 Hb_003752_070 Hb_003752_070 Hb_006569_040--Hb_003752_070 Hb_005389_170--Hb_010174_090 Hb_005389_170--Hb_003752_070 Hb_005389_170--Hb_000613_120 Hb_005162_110 Hb_005162_110 Hb_005389_170--Hb_005162_110 Hb_001935_100 Hb_001935_100 Hb_005389_170--Hb_001935_100 Hb_005389_170--Hb_006787_090 Hb_006555_040 Hb_006555_040 Hb_001930_030--Hb_006555_040 Hb_005731_110 Hb_005731_110 Hb_001930_030--Hb_005731_110 Hb_000445_070 Hb_000445_070 Hb_001930_030--Hb_000445_070 Hb_015292_040 Hb_015292_040 Hb_001930_030--Hb_015292_040 Hb_001930_030--Hb_004994_080 Hb_000436_100 Hb_000436_100 Hb_001930_030--Hb_000436_100 Hb_000826_030--Hb_001158_160 Hb_002876_300 Hb_002876_300 Hb_000826_030--Hb_002876_300 Hb_030414_040 Hb_030414_040 Hb_000826_030--Hb_030414_040 Hb_012438_030 Hb_012438_030 Hb_000826_030--Hb_012438_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
30.0417 33.8296 87.2014 15.685 35.2085 23.1369
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
32.424 19.2105 10.5903 28.6027 58.4833

CAGE analysis