Hb_000364_100

Information

Type -
Description -
Location Contig364: 109927-113901
Sequence    

Annotation

kegg
ID pop:POPTR_0007s10820g
description POPTRDRAFT_1083145; hypothetical protein
nr
ID XP_012079268.1
description PREDICTED: uncharacterized protein LOC105639739 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067K6U2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12427 PE=4 SV=1
Gene Ontology
ID GO:0005739
description PREDICTED: uncharacterized protein LOC105639739

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_37449: 109990-113897 , PASA_asmbl_37450: 110111-113918
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000364_100 0.0 - - PREDICTED: uncharacterized protein LOC105639739 [Jatropha curcas]
2 Hb_000532_100 0.0719236388 - - glutathione-s-transferase theta, gst, putative [Ricinus communis]
3 Hb_004994_080 0.0775190027 - - PREDICTED: cell division protein FtsY homolog, chloroplastic isoform X1 [Jatropha curcas]
4 Hb_000826_030 0.0840006717 - - PREDICTED: putative tRNA pseudouridine synthase isoform X1 [Jatropha curcas]
5 Hb_001158_160 0.0865377992 - - PREDICTED: RNA pseudouridine synthase 7 isoform X1 [Jatropha curcas]
6 Hb_000284_130 0.0867493624 - - sodium-bile acid cotransporter, putative [Ricinus communis]
7 Hb_011386_050 0.0978278668 - - PREDICTED: malonyl-CoA-acyl carrier protein transacylase, mitochondrial [Jatropha curcas]
8 Hb_003752_070 0.0983101925 - - PREDICTED: uncharacterized protein LOC105643912 isoform X1 [Jatropha curcas]
9 Hb_010174_090 0.1021917093 - - PREDICTED: ALBINO3-like protein 1, chloroplastic [Jatropha curcas]
10 Hb_015292_040 0.1043514546 - - PREDICTED: myb-like protein X [Jatropha curcas]
11 Hb_005162_110 0.1056865954 - - PREDICTED: uncharacterized protein LOC105648430 [Jatropha curcas]
12 Hb_077026_010 0.110322986 - - PREDICTED: phosphatidylinositol 4-kinase alpha 2 [Jatropha curcas]
13 Hb_012438_030 0.1107322758 - - PREDICTED: protein sym-1 [Jatropha curcas]
14 Hb_001623_490 0.1117347187 - - PREDICTED: haloacid dehalogenase-like hydrolase domain-containing protein At2g33255 isoform X2 [Jatropha curcas]
15 Hb_000663_020 0.1118389002 - - PREDICTED: alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitochondrial isoform X1 [Jatropha curcas]
16 Hb_000703_290 0.1120498391 - - aldo/keto reductase, putative [Ricinus communis]
17 Hb_021650_010 0.1124891247 - - hypothetical protein JCGZ_09648 [Jatropha curcas]
18 Hb_004109_120 0.1125459729 - - PREDICTED: kinesin-related protein 6 isoform X1 [Jatropha curcas]
19 Hb_001930_030 0.1134494019 - - PREDICTED: 30S ribosomal protein S10, chloroplastic [Jatropha curcas]
20 Hb_009476_130 0.1139159847 - - hypothetical protein VITISV_005430 [Vitis vinifera]

Gene co-expression network

sample Hb_000364_100 Hb_000364_100 Hb_000532_100 Hb_000532_100 Hb_000364_100--Hb_000532_100 Hb_004994_080 Hb_004994_080 Hb_000364_100--Hb_004994_080 Hb_000826_030 Hb_000826_030 Hb_000364_100--Hb_000826_030 Hb_001158_160 Hb_001158_160 Hb_000364_100--Hb_001158_160 Hb_000284_130 Hb_000284_130 Hb_000364_100--Hb_000284_130 Hb_011386_050 Hb_011386_050 Hb_000364_100--Hb_011386_050 Hb_010174_090 Hb_010174_090 Hb_000532_100--Hb_010174_090 Hb_006569_040 Hb_006569_040 Hb_000532_100--Hb_006569_040 Hb_005389_170 Hb_005389_170 Hb_000532_100--Hb_005389_170 Hb_001930_030 Hb_001930_030 Hb_000532_100--Hb_001930_030 Hb_000532_100--Hb_000826_030 Hb_007263_010 Hb_007263_010 Hb_004994_080--Hb_007263_010 Hb_000181_060 Hb_000181_060 Hb_004994_080--Hb_000181_060 Hb_004994_080--Hb_011386_050 Hb_005162_110 Hb_005162_110 Hb_004994_080--Hb_005162_110 Hb_006555_040 Hb_006555_040 Hb_004994_080--Hb_006555_040 Hb_000826_030--Hb_001158_160 Hb_002876_300 Hb_002876_300 Hb_000826_030--Hb_002876_300 Hb_030414_040 Hb_030414_040 Hb_000826_030--Hb_030414_040 Hb_000826_030--Hb_010174_090 Hb_012438_030 Hb_012438_030 Hb_000826_030--Hb_012438_030 Hb_001158_160--Hb_030414_040 Hb_021943_080 Hb_021943_080 Hb_001158_160--Hb_021943_080 Hb_031284_010 Hb_031284_010 Hb_001158_160--Hb_031284_010 Hb_000120_210 Hb_000120_210 Hb_001158_160--Hb_000120_210 Hb_004096_240 Hb_004096_240 Hb_001158_160--Hb_004096_240 Hb_006787_090 Hb_006787_090 Hb_000284_130--Hb_006787_090 Hb_021732_010 Hb_021732_010 Hb_000284_130--Hb_021732_010 Hb_000284_130--Hb_004994_080 Hb_000284_130--Hb_000181_060 Hb_003752_070 Hb_003752_070 Hb_000284_130--Hb_003752_070 Hb_000340_130 Hb_000340_130 Hb_011386_050--Hb_000340_130 Hb_002027_320 Hb_002027_320 Hb_011386_050--Hb_002027_320 Hb_011386_050--Hb_006555_040 Hb_011386_050--Hb_007263_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.99638 3.84193 14.2196 3.79627 4.51746 4.27607
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.83272 3.11762 1.42712 4.38245 7.83885

CAGE analysis