Hb_011386_050

Information

Type -
Description -
Location Contig11386: 25833-29625
Sequence    

Annotation

kegg
ID rcu:RCOM_1403260
description Malonyl-CoA : ACP Acyltransferase (MCAAT) (EC:2.3.1.39)
nr
ID XP_012078607.1
description PREDICTED: malonyl-CoA-acyl carrier protein transacylase, mitochondrial [Jatropha curcas]
swissprot
ID Q8IVS2
description Malonyl-CoA-acyl carrier protein transacylase, mitochondrial OS=Homo sapiens GN=MCAT PE=1 SV=2
trembl
ID A0A067LEW8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17355 PE=4 SV=1
Gene Ontology
ID GO:0009570
description malonyl- -acyl carrier protein mitochondrial

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_04163: 25839-29475 , PASA_asmbl_04164: 25858-29517
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_011386_050 0.0 - - PREDICTED: malonyl-CoA-acyl carrier protein transacylase, mitochondrial [Jatropha curcas]
2 Hb_004994_080 0.0794119722 - - PREDICTED: cell division protein FtsY homolog, chloroplastic isoform X1 [Jatropha curcas]
3 Hb_000340_130 0.0887673054 - - PREDICTED: uncharacterized protein LOC105650033 isoform X1 [Jatropha curcas]
4 Hb_002027_320 0.0961181635 - - PREDICTED: RNA-binding protein BRN1 [Jatropha curcas]
5 Hb_006555_040 0.0965682574 - - PREDICTED: uncharacterized protein LOC105639405 [Jatropha curcas]
6 Hb_007263_010 0.0974680418 - - PREDICTED: clustered mitochondria protein homolog [Jatropha curcas]
7 Hb_000364_100 0.0978278668 - - PREDICTED: uncharacterized protein LOC105639739 [Jatropha curcas]
8 Hb_000284_130 0.1115418695 - - sodium-bile acid cotransporter, putative [Ricinus communis]
9 Hb_010080_010 0.1156830004 - - PREDICTED: uncharacterized protein LOC105635247 [Jatropha curcas]
10 Hb_000211_100 0.1213747644 - - PREDICTED: biotin synthase [Jatropha curcas]
11 Hb_029142_030 0.1236164735 rubber biosynthesis Gene Name: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [Hevea brasiliensis]
12 Hb_001930_030 0.1245071632 - - PREDICTED: 30S ribosomal protein S10, chloroplastic [Jatropha curcas]
13 Hb_015292_040 0.1247004986 - - PREDICTED: myb-like protein X [Jatropha curcas]
14 Hb_002255_040 0.1256541119 - - PREDICTED: biotin synthase [Jatropha curcas]
15 Hb_007451_040 0.1278520735 - - PREDICTED: uncharacterized protein LOC105643411 [Jatropha curcas]
16 Hb_006501_050 0.131263846 - - PREDICTED: cell division cycle protein 27 homolog B [Jatropha curcas]
17 Hb_000905_120 0.1313812344 - - PREDICTED: uncharacterized protein LOC105628677 [Jatropha curcas]
18 Hb_005975_010 0.1314080806 - - [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase, putative [Ricinus communis]
19 Hb_005162_110 0.1315782779 - - PREDICTED: uncharacterized protein LOC105648430 [Jatropha curcas]
20 Hb_000181_060 0.1320574491 - - PREDICTED: 30S ribosomal protein S20, chloroplastic [Jatropha curcas]

Gene co-expression network

sample Hb_011386_050 Hb_011386_050 Hb_004994_080 Hb_004994_080 Hb_011386_050--Hb_004994_080 Hb_000340_130 Hb_000340_130 Hb_011386_050--Hb_000340_130 Hb_002027_320 Hb_002027_320 Hb_011386_050--Hb_002027_320 Hb_006555_040 Hb_006555_040 Hb_011386_050--Hb_006555_040 Hb_007263_010 Hb_007263_010 Hb_011386_050--Hb_007263_010 Hb_000364_100 Hb_000364_100 Hb_011386_050--Hb_000364_100 Hb_004994_080--Hb_007263_010 Hb_004994_080--Hb_000364_100 Hb_000181_060 Hb_000181_060 Hb_004994_080--Hb_000181_060 Hb_005162_110 Hb_005162_110 Hb_004994_080--Hb_005162_110 Hb_004994_080--Hb_006555_040 Hb_005975_010 Hb_005975_010 Hb_000340_130--Hb_005975_010 Hb_005649_100 Hb_005649_100 Hb_000340_130--Hb_005649_100 Hb_002686_080 Hb_002686_080 Hb_000340_130--Hb_002686_080 Hb_000012_270 Hb_000012_270 Hb_000340_130--Hb_000012_270 Hb_000002_120 Hb_000002_120 Hb_000340_130--Hb_000002_120 Hb_002027_320--Hb_007263_010 Hb_000392_450 Hb_000392_450 Hb_002027_320--Hb_000392_450 Hb_002027_320--Hb_004994_080 Hb_011381_040 Hb_011381_040 Hb_002027_320--Hb_011381_040 Hb_002027_320--Hb_000181_060 Hb_000140_440 Hb_000140_440 Hb_006555_040--Hb_000140_440 Hb_001930_030 Hb_001930_030 Hb_006555_040--Hb_001930_030 Hb_006555_040--Hb_007263_010 Hb_002255_040 Hb_002255_040 Hb_006555_040--Hb_002255_040 Hb_007451_040 Hb_007451_040 Hb_007263_010--Hb_007451_040 Hb_007263_010--Hb_000392_450 Hb_000532_100 Hb_000532_100 Hb_000364_100--Hb_000532_100 Hb_000826_030 Hb_000826_030 Hb_000364_100--Hb_000826_030 Hb_001158_160 Hb_001158_160 Hb_000364_100--Hb_001158_160 Hb_000284_130 Hb_000284_130 Hb_000364_100--Hb_000284_130
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
23.7768 13.2646 93.1935 21.0853 20.8028 15.7249
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
22.2826 19.2081 9.51138 22.5007 29.1534

CAGE analysis