Hb_000120_250

Information

Type -
Description -
Location Contig120: 163200-182006
Sequence    

Annotation

kegg
ID rcu:RCOM_0612720
description hypothetical protein
nr
ID XP_012067266.1
description PREDICTED: uncharacterized protein LOC105630152 isoform X1 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LDI8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08444 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_06090: 162975-181473 , PASA_asmbl_06091: 162975-181473
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000120_250 0.0 - - PREDICTED: uncharacterized protein LOC105630152 isoform X1 [Jatropha curcas]
2 Hb_011671_310 0.0983536899 - - PREDICTED: polycomb group protein EMBRYONIC FLOWER 2 [Jatropha curcas]
3 Hb_010080_010 0.0993123024 - - PREDICTED: uncharacterized protein LOC105635247 [Jatropha curcas]
4 Hb_029388_010 0.1136843763 transcription factor TF Family: C2C2-CO-like PREDICTED: zinc finger protein CONSTANS-LIKE 15-like [Jatropha curcas]
5 Hb_002311_480 0.1157157839 - - PREDICTED: condensin-2 complex subunit H2 isoform X2 [Jatropha curcas]
6 Hb_100790_010 0.1180631445 - - conserved hypothetical protein [Ricinus communis]
7 Hb_000979_060 0.1275328662 - - PREDICTED: protein PLANT CADMIUM RESISTANCE 2-like [Gossypium raimondii]
8 Hb_001500_120 0.1317712227 - - ABC transporter family protein [Hevea brasiliensis]
9 Hb_001277_280 0.1358701258 - - PREDICTED: protein argonaute 10 [Jatropha curcas]
10 Hb_005194_020 0.1370110994 - - PREDICTED: UPF0553 protein-like isoform X1 [Jatropha curcas]
11 Hb_000086_700 0.1372475416 - - PREDICTED: 14-3-3 protein 6 [Jatropha curcas]
12 Hb_001517_050 0.1391319034 transcription factor TF Family: BBR-BPC conserved hypothetical protein [Ricinus communis]
13 Hb_005977_030 0.1436344123 - - PREDICTED: monothiol glutaredoxin-S10-like [Jatropha curcas]
14 Hb_004712_190 0.1442558836 - - PREDICTED: uncharacterized protein LOC105633105 [Jatropha curcas]
15 Hb_001633_090 0.1490324367 - - PREDICTED: mitochondrial phosphate carrier protein 3, mitochondrial [Jatropha curcas]
16 Hb_001252_240 0.1494777753 - - PREDICTED: protein SPIRAL1-like 3 [Jatropha curcas]
17 Hb_000951_100 0.150773209 - - PREDICTED: uncharacterized protein LOC103436565 isoform X1 [Malus domestica]
18 Hb_000009_220 0.1510277786 - - PREDICTED: calcium uniporter protein 2, mitochondrial-like [Jatropha curcas]
19 Hb_000975_240 0.151220347 - - hypothetical protein JCGZ_22006 [Jatropha curcas]
20 Hb_000211_100 0.1512250047 - - PREDICTED: biotin synthase [Jatropha curcas]

Gene co-expression network

sample Hb_000120_250 Hb_000120_250 Hb_011671_310 Hb_011671_310 Hb_000120_250--Hb_011671_310 Hb_010080_010 Hb_010080_010 Hb_000120_250--Hb_010080_010 Hb_029388_010 Hb_029388_010 Hb_000120_250--Hb_029388_010 Hb_002311_480 Hb_002311_480 Hb_000120_250--Hb_002311_480 Hb_100790_010 Hb_100790_010 Hb_000120_250--Hb_100790_010 Hb_000979_060 Hb_000979_060 Hb_000120_250--Hb_000979_060 Hb_001500_120 Hb_001500_120 Hb_011671_310--Hb_001500_120 Hb_005977_030 Hb_005977_030 Hb_011671_310--Hb_005977_030 Hb_011671_310--Hb_002311_480 Hb_001005_020 Hb_001005_020 Hb_011671_310--Hb_001005_020 Hb_001761_120 Hb_001761_120 Hb_011671_310--Hb_001761_120 Hb_007290_030 Hb_007290_030 Hb_011671_310--Hb_007290_030 Hb_010080_010--Hb_100790_010 Hb_000975_240 Hb_000975_240 Hb_010080_010--Hb_000975_240 Hb_011386_050 Hb_011386_050 Hb_010080_010--Hb_011386_050 Hb_001277_280 Hb_001277_280 Hb_010080_010--Hb_001277_280 Hb_000340_130 Hb_000340_130 Hb_010080_010--Hb_000340_130 Hb_001369_300 Hb_001369_300 Hb_029388_010--Hb_001369_300 Hb_029388_010--Hb_011671_310 Hb_029388_010--Hb_005977_030 Hb_029388_010--Hb_001500_120 Hb_001789_060 Hb_001789_060 Hb_029388_010--Hb_001789_060 Hb_002311_480--Hb_001500_120 Hb_002311_480--Hb_000979_060 Hb_002311_480--Hb_005977_030 Hb_004943_030 Hb_004943_030 Hb_002311_480--Hb_004943_030 Hb_000048_080 Hb_000048_080 Hb_002311_480--Hb_000048_080 Hb_146255_020 Hb_146255_020 Hb_100790_010--Hb_146255_020 Hb_006061_040 Hb_006061_040 Hb_100790_010--Hb_006061_040 Hb_001950_070 Hb_001950_070 Hb_100790_010--Hb_001950_070 Hb_100790_010--Hb_001500_120 Hb_000684_100 Hb_000684_100 Hb_000979_060--Hb_000684_100 Hb_005194_020 Hb_005194_020 Hb_000979_060--Hb_005194_020 Hb_000009_220 Hb_000009_220 Hb_000979_060--Hb_000009_220 Hb_001322_020 Hb_001322_020 Hb_000979_060--Hb_001322_020 Hb_000579_190 Hb_000579_190 Hb_000979_060--Hb_000579_190
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.35129 3.41284 12.0901 3.43683 1.64824 2.12858
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.47327 2.83277 4.14191 3.00266 1.41497

CAGE analysis