Hb_001761_120

Information

Type -
Description -
Location Contig1761: 144743-149391
Sequence    

Annotation

kegg
ID pop:POPTR_0014s00330g
description hypothetical protein
nr
ID KDP25029.1
description hypothetical protein JCGZ_22564 [Jatropha curcas]
swissprot
ID Q9NQZ5
description StAR-related lipid transfer protein 7, mitochondrial OS=Homo sapiens GN=STARD7 PE=1 SV=2
trembl
ID A0A067JZQ0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22564 PE=4 SV=1
Gene Ontology
ID GO:0008289
description phosphatidylcholine transfer

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_16885: 144844-147506 , PASA_asmbl_16886: 144844-147506 , PASA_asmbl_16887: 146492-146758 , PASA_asmbl_16888: 147290-149355 , PASA_asmbl_16889: 145551-147506
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001761_120 0.0 - - hypothetical protein JCGZ_22564 [Jatropha curcas]
2 Hb_170416_010 0.0534643279 - - PREDICTED: cold-regulated 413 plasma membrane protein 2-like [Jatropha curcas]
3 Hb_003531_080 0.0628657986 - - PREDICTED: small G protein signaling modulator 2 isoform X1 [Jatropha curcas]
4 Hb_007290_030 0.0700913961 transcription factor TF Family: bZIP PREDICTED: uncharacterized protein LOC105629473 [Jatropha curcas]
5 Hb_004052_080 0.0733166536 - - conserved hypothetical protein [Ricinus communis]
6 Hb_000339_040 0.0736560592 - - PREDICTED: SAP30-binding protein isoform X2 [Jatropha curcas]
7 Hb_000103_340 0.0738166927 - - PREDICTED: uncharacterized protein LOC105632051 isoform X4 [Jatropha curcas]
8 Hb_043792_010 0.0757634551 - - PREDICTED: uncharacterized protein LOC105645113 isoform X2 [Jatropha curcas]
9 Hb_007007_120 0.077698976 - - PREDICTED: lysophospholipid acyltransferase LPEAT2 isoform X1 [Jatropha curcas]
10 Hb_000169_080 0.0778259643 transcription factor TF Family: TUB PREDICTED: tubby-like F-box protein 3 [Jatropha curcas]
11 Hb_002326_040 0.0786342341 transcription factor TF Family: B3 PREDICTED: B3 domain-containing protein Os01g0723500-like [Jatropha curcas]
12 Hb_002716_060 0.0797805044 - - carboxylesterase np, putative [Ricinus communis]
13 Hb_001226_150 0.0803706574 - - PREDICTED: serine/threonine-protein kinase 38-like isoform X3 [Jatropha curcas]
14 Hb_001025_120 0.0804879325 transcription factor TF Family: Jumonji PREDICTED: jmjC domain-containing protein 4 [Jatropha curcas]
15 Hb_000567_190 0.0805623053 - - PREDICTED: protein SCAR3 isoform X2 [Jatropha curcas]
16 Hb_010931_070 0.0807363227 - - PREDICTED: cleavage and polyadenylation specificity factor subunit 2 isoform X1 [Jatropha curcas]
17 Hb_000089_210 0.0827001794 - - unknown [Medicago truncatula]
18 Hb_006275_020 0.0832421403 - - PREDICTED: VIN3-like protein 2 [Jatropha curcas]
19 Hb_001124_010 0.0835986924 - - PREDICTED: serine/threonine-protein kinase WNK8 isoform X2 [Jatropha curcas]
20 Hb_001300_010 0.0848851551 transcription factor TF Family: C3H nucleic acid binding protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_001761_120 Hb_001761_120 Hb_170416_010 Hb_170416_010 Hb_001761_120--Hb_170416_010 Hb_003531_080 Hb_003531_080 Hb_001761_120--Hb_003531_080 Hb_007290_030 Hb_007290_030 Hb_001761_120--Hb_007290_030 Hb_004052_080 Hb_004052_080 Hb_001761_120--Hb_004052_080 Hb_000339_040 Hb_000339_040 Hb_001761_120--Hb_000339_040 Hb_000103_340 Hb_000103_340 Hb_001761_120--Hb_000103_340 Hb_001226_150 Hb_001226_150 Hb_170416_010--Hb_001226_150 Hb_007765_100 Hb_007765_100 Hb_170416_010--Hb_007765_100 Hb_007007_120 Hb_007007_120 Hb_170416_010--Hb_007007_120 Hb_170416_010--Hb_003531_080 Hb_010931_070 Hb_010931_070 Hb_170416_010--Hb_010931_070 Hb_001472_060 Hb_001472_060 Hb_003531_080--Hb_001472_060 Hb_003531_080--Hb_007007_120 Hb_000340_420 Hb_000340_420 Hb_003531_080--Hb_000340_420 Hb_003531_080--Hb_007290_030 Hb_000352_350 Hb_000352_350 Hb_007290_030--Hb_000352_350 Hb_001776_060 Hb_001776_060 Hb_007290_030--Hb_001776_060 Hb_000227_270 Hb_000227_270 Hb_007290_030--Hb_000227_270 Hb_000239_060 Hb_000239_060 Hb_007290_030--Hb_000239_060 Hb_001635_040 Hb_001635_040 Hb_007290_030--Hb_001635_040 Hb_004052_080--Hb_007007_120 Hb_004052_080--Hb_000339_040 Hb_003513_010 Hb_003513_010 Hb_004052_080--Hb_003513_010 Hb_002876_230 Hb_002876_230 Hb_004052_080--Hb_002876_230 Hb_003428_010 Hb_003428_010 Hb_004052_080--Hb_003428_010 Hb_003861_060 Hb_003861_060 Hb_004052_080--Hb_003861_060 Hb_001456_060 Hb_001456_060 Hb_000339_040--Hb_001456_060 Hb_000339_040--Hb_002876_230 Hb_009911_030 Hb_009911_030 Hb_000339_040--Hb_009911_030 Hb_004837_180 Hb_004837_180 Hb_000339_040--Hb_004837_180 Hb_005867_070 Hb_005867_070 Hb_000339_040--Hb_005867_070 Hb_000214_050 Hb_000214_050 Hb_000103_340--Hb_000214_050 Hb_000635_090 Hb_000635_090 Hb_000103_340--Hb_000635_090 Hb_001018_090 Hb_001018_090 Hb_000103_340--Hb_001018_090 Hb_005214_140 Hb_005214_140 Hb_000103_340--Hb_005214_140 Hb_006275_020 Hb_006275_020 Hb_000103_340--Hb_006275_020 Hb_000103_340--Hb_170416_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
6.90519 8.70084 12.9798 7.92984 5.73117 6.00199
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.95817 6.21003 8.02631 4.95242 7.29295

CAGE analysis