Hb_003531_080

Information

Type -
Description -
Location Contig3531: 94388-98247
Sequence    

Annotation

kegg
ID rcu:RCOM_1748460
description hypothetical protein
nr
ID XP_012092526.1
description PREDICTED: small G protein signaling modulator 2 isoform X1 [Jatropha curcas]
swissprot
ID Q9UUH7
description GTPase-activating protein gyp7 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=gyp7 PE=3 SV=1
trembl
ID A0A067J9R8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05157 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_36674: 94302-98239
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003531_080 0.0 - - PREDICTED: small G protein signaling modulator 2 isoform X1 [Jatropha curcas]
2 Hb_001761_120 0.0628657986 - - hypothetical protein JCGZ_22564 [Jatropha curcas]
3 Hb_001472_060 0.0638531664 - - PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform X1 [Jatropha curcas]
4 Hb_170416_010 0.0650445954 - - PREDICTED: cold-regulated 413 plasma membrane protein 2-like [Jatropha curcas]
5 Hb_007007_120 0.066583076 - - PREDICTED: lysophospholipid acyltransferase LPEAT2 isoform X1 [Jatropha curcas]
6 Hb_000340_420 0.0702627265 - - PREDICTED: LEC14B protein isoform X2 [Jatropha curcas]
7 Hb_007290_030 0.0780069422 transcription factor TF Family: bZIP PREDICTED: uncharacterized protein LOC105629473 [Jatropha curcas]
8 Hb_004052_080 0.0781271073 - - conserved hypothetical protein [Ricinus communis]
9 Hb_000869_020 0.0809109119 - - PREDICTED: uncharacterized protein LOC105641036 [Jatropha curcas]
10 Hb_001500_060 0.080995148 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein ZFN-like [Jatropha curcas]
11 Hb_010931_070 0.0819036035 - - PREDICTED: cleavage and polyadenylation specificity factor subunit 2 isoform X1 [Jatropha curcas]
12 Hb_004097_130 0.0855744149 - - Inositol-tetrakisphosphate 1-kinase, putative [Ricinus communis]
13 Hb_154471_020 0.0859895874 - - squalene synthetase [Euphorbia tirucalli]
14 Hb_013358_040 0.0886823744 - - PREDICTED: stromal cell-derived factor 2-like protein [Jatropha curcas]
15 Hb_000136_110 0.0888301836 - - hypothetical protein B456_011G031000, partial [Gossypium raimondii]
16 Hb_000028_520 0.0915844738 - - hypothetical protein L484_025125 [Morus notabilis]
17 Hb_005588_080 0.091746334 - - PREDICTED: uncharacterized protein LOC105633661 [Jatropha curcas]
18 Hb_000599_180 0.0939685884 - - ABC transporter family protein [Hevea brasiliensis]
19 Hb_001124_010 0.0941211832 - - PREDICTED: serine/threonine-protein kinase WNK8 isoform X2 [Jatropha curcas]
20 Hb_000637_110 0.0941412879 - - hypothetical protein B456_013G081300 [Gossypium raimondii]

Gene co-expression network

sample Hb_003531_080 Hb_003531_080 Hb_001761_120 Hb_001761_120 Hb_003531_080--Hb_001761_120 Hb_001472_060 Hb_001472_060 Hb_003531_080--Hb_001472_060 Hb_170416_010 Hb_170416_010 Hb_003531_080--Hb_170416_010 Hb_007007_120 Hb_007007_120 Hb_003531_080--Hb_007007_120 Hb_000340_420 Hb_000340_420 Hb_003531_080--Hb_000340_420 Hb_007290_030 Hb_007290_030 Hb_003531_080--Hb_007290_030 Hb_001761_120--Hb_170416_010 Hb_001761_120--Hb_007290_030 Hb_004052_080 Hb_004052_080 Hb_001761_120--Hb_004052_080 Hb_000339_040 Hb_000339_040 Hb_001761_120--Hb_000339_040 Hb_000103_340 Hb_000103_340 Hb_001761_120--Hb_000103_340 Hb_004097_130 Hb_004097_130 Hb_001472_060--Hb_004097_130 Hb_021409_180 Hb_021409_180 Hb_001472_060--Hb_021409_180 Hb_000808_050 Hb_000808_050 Hb_001472_060--Hb_000808_050 Hb_001205_120 Hb_001205_120 Hb_001472_060--Hb_001205_120 Hb_000019_150 Hb_000019_150 Hb_001472_060--Hb_000019_150 Hb_001226_150 Hb_001226_150 Hb_170416_010--Hb_001226_150 Hb_007765_100 Hb_007765_100 Hb_170416_010--Hb_007765_100 Hb_170416_010--Hb_007007_120 Hb_010931_070 Hb_010931_070 Hb_170416_010--Hb_010931_070 Hb_007007_120--Hb_004052_080 Hb_003428_010 Hb_003428_010 Hb_007007_120--Hb_003428_010 Hb_002876_230 Hb_002876_230 Hb_007007_120--Hb_002876_230 Hb_007007_120--Hb_001226_150 Hb_003513_010 Hb_003513_010 Hb_007007_120--Hb_003513_010 Hb_007007_120--Hb_000339_040 Hb_132840_110 Hb_132840_110 Hb_000340_420--Hb_132840_110 Hb_000340_420--Hb_007007_120 Hb_001789_190 Hb_001789_190 Hb_000340_420--Hb_001789_190 Hb_000340_420--Hb_007290_030 Hb_000214_050 Hb_000214_050 Hb_000340_420--Hb_000214_050 Hb_000352_350 Hb_000352_350 Hb_007290_030--Hb_000352_350 Hb_001776_060 Hb_001776_060 Hb_007290_030--Hb_001776_060 Hb_000227_270 Hb_000227_270 Hb_007290_030--Hb_000227_270 Hb_000239_060 Hb_000239_060 Hb_007290_030--Hb_000239_060 Hb_001635_040 Hb_001635_040 Hb_007290_030--Hb_001635_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
21.0385 17.3082 31.6127 20.4987 13.9991 17.0285
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
17.5771 14.5528 23.5222 11.3887 21.249

CAGE analysis