Hb_000135_070

Information

Type -
Description -
Location Contig135: 113599-116455
Sequence    

Annotation

kegg
ID cit:102618274
description inositol oxygenase 1-like
nr
ID XP_012069048.1
description PREDICTED: inositol oxygenase 1-like [Jatropha curcas]
swissprot
ID Q8L799
description Inositol oxygenase 1 OS=Arabidopsis thaliana GN=MIOX1 PE=2 SV=1
trembl
ID A0A067L9Q0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24823 PE=4 SV=1
Gene Ontology
ID GO:0005737
description inositol oxygenase 1-like isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000135_070 0.0 - - PREDICTED: inositol oxygenase 1-like [Jatropha curcas]
2 Hb_179924_010 0.1741145175 - - PREDICTED: pentatricopeptide repeat-containing protein At1g62930, chloroplastic-like [Populus euphratica]
3 Hb_001500_070 0.1745711651 - - conserved hypothetical protein [Ricinus communis]
4 Hb_004129_050 0.1817879828 - - PREDICTED: 3-hydroxyisobutyryl-CoA hydrolase-like protein 5 [Jatropha curcas]
5 Hb_001731_030 0.1829935753 - - PREDICTED: E3 ubiquitin-protein ligase RHF2A-like [Gossypium raimondii]
6 Hb_007185_040 0.1888066741 - - PREDICTED: pyrroline-5-carboxylate reductase [Jatropha curcas]
7 Hb_003626_050 0.1897180217 - - malic enzyme, putative [Ricinus communis]
8 Hb_107298_010 0.190365069 - - PREDICTED: E3 ubiquitin-protein ligase RHF2A isoform X2 [Jatropha curcas]
9 Hb_011282_020 0.1913049527 transcription factor TF Family: MYB-related conserved hypothetical protein [Ricinus communis]
10 Hb_000159_120 0.1927112187 - - PREDICTED: uncharacterized protein LOC105632857 [Jatropha curcas]
11 Hb_000041_060 0.1931980698 - - cinnamoyl-CoA reductase, putative [Ricinus communis]
12 Hb_000808_170 0.197026057 - - protein disulfide isomerase, putative [Ricinus communis]
13 Hb_008226_070 0.1980125784 - - PREDICTED: expansin-A8 [Jatropha curcas]
14 Hb_000505_100 0.1999711969 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC100250663 [Vitis vinifera]
15 Hb_012022_080 0.2000663222 - - ubiquitin-protein ligase, putative [Ricinus communis]
16 Hb_002213_090 0.2004004384 - - PREDICTED: uncharacterized protein LOC105640147 [Jatropha curcas]
17 Hb_009732_020 0.2042865974 - - PREDICTED: zinc-metallopeptidase, peroxisomal-like [Jatropha curcas]
18 Hb_005489_140 0.205051618 - - PREDICTED: maspardin [Jatropha curcas]
19 Hb_000120_720 0.2060634121 transcription factor TF Family: HB homeobox-leucine zipper family protein [Populus trichocarpa]
20 Hb_019053_030 0.2061339981 - - PREDICTED: sulfite oxidase [Jatropha curcas]

Gene co-expression network

sample Hb_000135_070 Hb_000135_070 Hb_179924_010 Hb_179924_010 Hb_000135_070--Hb_179924_010 Hb_001500_070 Hb_001500_070 Hb_000135_070--Hb_001500_070 Hb_004129_050 Hb_004129_050 Hb_000135_070--Hb_004129_050 Hb_001731_030 Hb_001731_030 Hb_000135_070--Hb_001731_030 Hb_007185_040 Hb_007185_040 Hb_000135_070--Hb_007185_040 Hb_003626_050 Hb_003626_050 Hb_000135_070--Hb_003626_050 Hb_000159_120 Hb_000159_120 Hb_179924_010--Hb_000159_120 Hb_000227_070 Hb_000227_070 Hb_179924_010--Hb_000227_070 Hb_179924_010--Hb_001731_030 Hb_012022_080 Hb_012022_080 Hb_179924_010--Hb_012022_080 Hb_004586_350 Hb_004586_350 Hb_179924_010--Hb_004586_350 Hb_019053_030 Hb_019053_030 Hb_179924_010--Hb_019053_030 Hb_001500_070--Hb_003626_050 Hb_004041_100 Hb_004041_100 Hb_001500_070--Hb_004041_100 Hb_002213_090 Hb_002213_090 Hb_001500_070--Hb_002213_090 Hb_000625_030 Hb_000625_030 Hb_001500_070--Hb_000625_030 Hb_000347_110 Hb_000347_110 Hb_001500_070--Hb_000347_110 Hb_012325_010 Hb_012325_010 Hb_001500_070--Hb_012325_010 Hb_000244_280 Hb_000244_280 Hb_004129_050--Hb_000244_280 Hb_000041_060 Hb_000041_060 Hb_004129_050--Hb_000041_060 Hb_009732_020 Hb_009732_020 Hb_004129_050--Hb_009732_020 Hb_006717_070 Hb_006717_070 Hb_004129_050--Hb_006717_070 Hb_004129_050--Hb_003626_050 Hb_012545_090 Hb_012545_090 Hb_004129_050--Hb_012545_090 Hb_001493_150 Hb_001493_150 Hb_001731_030--Hb_001493_150 Hb_000808_170 Hb_000808_170 Hb_001731_030--Hb_000808_170 Hb_028960_030 Hb_028960_030 Hb_001731_030--Hb_028960_030 Hb_073171_100 Hb_073171_100 Hb_001731_030--Hb_073171_100 Hb_001731_030--Hb_000159_120 Hb_011224_160 Hb_011224_160 Hb_001731_030--Hb_011224_160 Hb_172112_020 Hb_172112_020 Hb_007185_040--Hb_172112_020 Hb_001004_140 Hb_001004_140 Hb_007185_040--Hb_001004_140 Hb_002596_060 Hb_002596_060 Hb_007185_040--Hb_002596_060 Hb_010872_050 Hb_010872_050 Hb_007185_040--Hb_010872_050 Hb_016734_020 Hb_016734_020 Hb_007185_040--Hb_016734_020 Hb_107298_010 Hb_107298_010 Hb_007185_040--Hb_107298_010 Hb_003626_050--Hb_002213_090 Hb_000157_070 Hb_000157_070 Hb_003626_050--Hb_000157_070 Hb_003626_050--Hb_107298_010 Hb_000505_100 Hb_000505_100 Hb_003626_050--Hb_000505_100 Hb_006829_100 Hb_006829_100 Hb_003626_050--Hb_006829_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.2071 1.89248 5.52782 3.3106 0.973499 4.89517
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.25514 3.46214 0.922181 13.4342 2.60222

CAGE analysis