Hb_167973_010

Information

Type -
Description -
Location Contig167973: 217-471
Sequence    

Annotation

kegg
ID pop:POPTR_0025s00560g
description Pyrophosphate-energized vacuolar membrane proton pump family protein
nr
ID XP_012081156.1
description PREDICTED: pyrophosphate-energized vacuolar membrane proton pump [Jatropha curcas]
swissprot
ID P21616
description Pyrophosphate-energized vacuolar membrane proton pump OS=Vigna radiata var. radiata PE=1 SV=4
trembl
ID A0A067K5F3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17005 PE=3 SV=1
Gene Ontology
ID GO:0016020
description pyrophosphate-energized vacuolar membrane proton pump

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_167973_010 0.0 - - PREDICTED: pyrophosphate-energized vacuolar membrane proton pump [Jatropha curcas]
2 Hb_004884_030 0.1386062789 - - PREDICTED: ammonium transporter 3 member 3 [Vitis vinifera]
3 Hb_004875_010 0.1586923337 - - plasma membrane aquaporin 1 [Hevea brasiliensis]
4 Hb_000964_170 0.1608006029 - - Cellulose synthase A catalytic subunit 6 [UDP-forming], putative [Ricinus communis]
5 Hb_012353_040 0.1624654923 - - Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis]
6 Hb_119600_050 0.1628687615 - - sugar transporter, putative [Ricinus communis]
7 Hb_003632_030 0.1679753383 - - PREDICTED: heat shock cognate protein 80 [Jatropha curcas]
8 Hb_000482_150 0.1695524872 - - PREDICTED: zinc transporter 4, chloroplastic [Jatropha curcas]
9 Hb_001411_030 0.169665415 - - hypothetical protein POPTR_0003s09620g [Populus trichocarpa]
10 Hb_022250_100 0.1734468085 - - calnexin, putative [Ricinus communis]
11 Hb_002320_090 0.174103029 - - PREDICTED: endoglucanase 25-like [Jatropha curcas]
12 Hb_031931_020 0.1768654406 - - Minor histocompatibility antigen H13, putative [Ricinus communis]
13 Hb_150346_010 0.1782130337 - - NBS-LRR resistance protein RGH1 [Manihot esculenta]
14 Hb_006355_020 0.1789102655 - - PREDICTED: CLIP-associated protein [Jatropha curcas]
15 Hb_000562_100 0.1790274757 - - PREDICTED: protein IQ-DOMAIN 32 [Jatropha curcas]
16 Hb_005288_110 0.1805842258 - - PREDICTED: uncharacterized protein LOC105647752 [Jatropha curcas]
17 Hb_006629_020 0.1809257292 - - ferric reductase oxidase [Manihot esculenta]
18 Hb_000997_070 0.1839799462 - - PREDICTED: ureidoglycolate hydrolase isoform X1 [Jatropha curcas]
19 Hb_000649_270 0.1844034413 - - DUF26 domain-containing protein 1 precursor, putative [Ricinus communis]
20 Hb_002636_040 0.1845925304 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH49 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_167973_010 Hb_167973_010 Hb_004884_030 Hb_004884_030 Hb_167973_010--Hb_004884_030 Hb_004875_010 Hb_004875_010 Hb_167973_010--Hb_004875_010 Hb_000964_170 Hb_000964_170 Hb_167973_010--Hb_000964_170 Hb_012353_040 Hb_012353_040 Hb_167973_010--Hb_012353_040 Hb_119600_050 Hb_119600_050 Hb_167973_010--Hb_119600_050 Hb_003632_030 Hb_003632_030 Hb_167973_010--Hb_003632_030 Hb_027380_230 Hb_027380_230 Hb_004884_030--Hb_027380_230 Hb_000482_150 Hb_000482_150 Hb_004884_030--Hb_000482_150 Hb_004701_050 Hb_004701_050 Hb_004884_030--Hb_004701_050 Hb_006355_020 Hb_006355_020 Hb_004884_030--Hb_006355_020 Hb_000376_060 Hb_000376_060 Hb_004884_030--Hb_000376_060 Hb_014720_030 Hb_014720_030 Hb_004875_010--Hb_014720_030 Hb_000922_220 Hb_000922_220 Hb_004875_010--Hb_000922_220 Hb_122273_020 Hb_122273_020 Hb_004875_010--Hb_122273_020 Hb_000649_270 Hb_000649_270 Hb_004875_010--Hb_000649_270 Hb_002005_030 Hb_002005_030 Hb_004875_010--Hb_002005_030 Hb_005772_030 Hb_005772_030 Hb_004875_010--Hb_005772_030 Hb_002320_090 Hb_002320_090 Hb_000964_170--Hb_002320_090 Hb_006916_030 Hb_006916_030 Hb_000964_170--Hb_006916_030 Hb_000445_370 Hb_000445_370 Hb_000964_170--Hb_000445_370 Hb_001411_050 Hb_001411_050 Hb_000964_170--Hb_001411_050 Hb_001140_180 Hb_001140_180 Hb_000964_170--Hb_001140_180 Hb_000270_710 Hb_000270_710 Hb_000964_170--Hb_000270_710 Hb_000562_100 Hb_000562_100 Hb_012353_040--Hb_000562_100 Hb_012353_040--Hb_005772_030 Hb_000997_070 Hb_000997_070 Hb_012353_040--Hb_000997_070 Hb_003849_120 Hb_003849_120 Hb_012353_040--Hb_003849_120 Hb_004204_210 Hb_004204_210 Hb_012353_040--Hb_004204_210 Hb_000866_070 Hb_000866_070 Hb_012353_040--Hb_000866_070 Hb_119600_050--Hb_003632_030 Hb_001411_030 Hb_001411_030 Hb_119600_050--Hb_001411_030 Hb_007123_050 Hb_007123_050 Hb_119600_050--Hb_007123_050 Hb_000284_230 Hb_000284_230 Hb_119600_050--Hb_000284_230 Hb_000608_300 Hb_000608_300 Hb_119600_050--Hb_000608_300 Hb_119600_050--Hb_006355_020 Hb_022250_100 Hb_022250_100 Hb_003632_030--Hb_022250_100 Hb_006846_080 Hb_006846_080 Hb_003632_030--Hb_006846_080 Hb_005250_010 Hb_005250_010 Hb_003632_030--Hb_005250_010 Hb_003632_030--Hb_001411_030 Hb_000562_050 Hb_000562_050 Hb_003632_030--Hb_000562_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
37.6572 96.1069 90.8293 187.512 179.832 123.338
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
9.41702 1.3994 19.8519 112.394 208.451

CAGE analysis