Hb_160715_010

Information

Type -
Description -
Location Contig160715: 4040-4537
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_160715_010 0.0 - - -
2 Hb_000422_160 0.1456931755 - - PREDICTED: probable receptor protein kinase TMK1 [Jatropha curcas]
3 Hb_001711_050 0.1727765992 - - -
4 Hb_001437_140 0.196159298 - - -
5 Hb_009541_010 0.2386099516 - - PREDICTED: polyadenylate-binding protein-interacting protein 6 [Jatropha curcas]
6 Hb_000256_070 0.2388453342 - - PREDICTED: uncharacterized protein At2g39795, mitochondrial [Jatropha curcas]
7 Hb_138462_010 0.2395893936 - - PREDICTED: SUMO-conjugating enzyme UBC9-A-like isoform X1 [Elaeis guineensis]
8 Hb_002284_180 0.2458669806 - - PREDICTED: glucan endo-1,3-beta-glucosidase 12 [Jatropha curcas]
9 Hb_000062_530 0.2511980326 - - PREDICTED: GDP-mannose transporter GONST3-like [Populus euphratica]
10 Hb_012738_030 0.2539008081 - - conserved hypothetical protein [Ricinus communis]
11 Hb_002863_120 0.262376938 desease resistance Gene Name: AAA_17 JHL25H03.3 [Jatropha curcas]
12 Hb_000422_130 0.2635004515 - - hypothetical protein JCGZ_15217 [Jatropha curcas]
13 Hb_017014_010 0.2636759205 - - PREDICTED: syntaxin-132-like isoform X1 [Jatropha curcas]
14 Hb_006911_050 0.2654829373 - - PREDICTED: uncharacterized protein LOC105628750 [Jatropha curcas]
15 Hb_039074_010 0.2687212316 - - NBS-LRR resistance protein RGH1 [Manihot esculenta]
16 Hb_146834_010 0.2701411207 - - Uncharacterized protein TCM_035385 [Theobroma cacao]
17 Hb_000320_260 0.2717934032 - - unnamed protein product [Vitis vinifera]
18 Hb_008790_040 0.2719012696 - - PREDICTED: cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG8 [Jatropha curcas]
19 Hb_183867_010 0.2725783979 - - PREDICTED: pentatricopeptide repeat-containing protein At1g62930, chloroplastic-like [Populus euphratica]
20 Hb_007527_070 0.2729731108 - - PREDICTED: uncharacterized protein LOC105637197 [Jatropha curcas]

Gene co-expression network

sample Hb_160715_010 Hb_160715_010 Hb_000422_160 Hb_000422_160 Hb_160715_010--Hb_000422_160 Hb_001711_050 Hb_001711_050 Hb_160715_010--Hb_001711_050 Hb_001437_140 Hb_001437_140 Hb_160715_010--Hb_001437_140 Hb_009541_010 Hb_009541_010 Hb_160715_010--Hb_009541_010 Hb_000256_070 Hb_000256_070 Hb_160715_010--Hb_000256_070 Hb_138462_010 Hb_138462_010 Hb_160715_010--Hb_138462_010 Hb_031284_030 Hb_031284_030 Hb_000422_160--Hb_031284_030 Hb_000028_490 Hb_000028_490 Hb_000422_160--Hb_000028_490 Hb_008790_040 Hb_008790_040 Hb_000422_160--Hb_008790_040 Hb_000062_530 Hb_000062_530 Hb_000422_160--Hb_000062_530 Hb_000540_160 Hb_000540_160 Hb_000422_160--Hb_000540_160 Hb_002863_120 Hb_002863_120 Hb_001711_050--Hb_002863_120 Hb_000928_050 Hb_000928_050 Hb_001711_050--Hb_000928_050 Hb_001711_050--Hb_000256_070 Hb_001711_050--Hb_138462_010 Hb_010534_050 Hb_010534_050 Hb_001711_050--Hb_010534_050 Hb_039074_010 Hb_039074_010 Hb_001437_140--Hb_039074_010 Hb_000244_260 Hb_000244_260 Hb_001437_140--Hb_000244_260 Hb_002072_010 Hb_002072_010 Hb_001437_140--Hb_002072_010 Hb_059741_010 Hb_059741_010 Hb_001437_140--Hb_059741_010 Hb_004409_030 Hb_004409_030 Hb_001437_140--Hb_004409_030 Hb_003471_020 Hb_003471_020 Hb_001437_140--Hb_003471_020 Hb_000414_140 Hb_000414_140 Hb_009541_010--Hb_000414_140 Hb_002928_020 Hb_002928_020 Hb_009541_010--Hb_002928_020 Hb_000320_260 Hb_000320_260 Hb_009541_010--Hb_000320_260 Hb_027043_010 Hb_027043_010 Hb_009541_010--Hb_027043_010 Hb_083493_010 Hb_083493_010 Hb_009541_010--Hb_083493_010 Hb_000466_070 Hb_000466_070 Hb_009541_010--Hb_000466_070 Hb_000656_160 Hb_000656_160 Hb_000256_070--Hb_000656_160 Hb_000103_250 Hb_000103_250 Hb_000256_070--Hb_000103_250 Hb_000889_100 Hb_000889_100 Hb_000256_070--Hb_000889_100 Hb_017014_010 Hb_017014_010 Hb_000256_070--Hb_017014_010 Hb_004088_040 Hb_004088_040 Hb_000256_070--Hb_004088_040 Hb_004899_060 Hb_004899_060 Hb_000256_070--Hb_004899_060 Hb_141296_010 Hb_141296_010 Hb_138462_010--Hb_141296_010 Hb_002611_030 Hb_002611_030 Hb_138462_010--Hb_002611_030 Hb_138462_010--Hb_017014_010 Hb_060458_010 Hb_060458_010 Hb_138462_010--Hb_060458_010 Hb_007527_070 Hb_007527_070 Hb_138462_010--Hb_007527_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.37837 6.79618 11.8724 36.7501 0.325643 15.0509
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.106136 15.6301 20.8335 7.33486

CAGE analysis