Hb_002863_120

Information

Type desease resistance
Description Gene Name: AAA_17
Location Contig2863: 118306-120786
Sequence    

Annotation

kegg
ID pop:POPTR_0001s32030g
description POPTRDRAFT_798001; NBS-like putative resistance family protein
nr
ID BAJ53243.1
description JHL25H03.3 [Jatropha curcas]
swissprot
ID O22727
description Probable disease resistance protein At1g61190 OS=Arabidopsis thaliana GN=At1g61190 PE=3 SV=1
trembl
ID E6NUD3
description JHL25H03.3 protein OS=Jatropha curcas GN=JHL25H03.3 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002863_120 0.0 desease resistance Gene Name: AAA_17 JHL25H03.3 [Jatropha curcas]
2 Hb_000206_190 0.1997114689 - - PREDICTED: F-box/LRR-repeat protein At4g14103-like [Pyrus x bretschneideri]
3 Hb_001711_050 0.2000464036 - - -
4 Hb_000853_400 0.2220029479 - - PREDICTED: CTP synthase [Jatropha curcas]
5 Hb_008778_010 0.2242428545 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
6 Hb_002035_080 0.2278382362 - - unnamed protein product [Vitis vinifera]
7 Hb_001882_130 0.2296576849 transcription factor TF Family: mTERF hypothetical protein VITISV_028996 [Vitis vinifera]
8 Hb_071869_010 0.229979877 - - PREDICTED: uncharacterized protein LOC105628378 isoform X2 [Jatropha curcas]
9 Hb_012738_030 0.2320759034 - - conserved hypothetical protein [Ricinus communis]
10 Hb_089206_010 0.2323516624 - - PREDICTED: receptor-like protein kinase FERONIA [Jatropha curcas]
11 Hb_004899_060 0.2405576769 - - 46 kDa ketoavyl-ACP synthase [Ricinus communis]
12 Hb_000334_180 0.2457950759 - - hypothetical protein JCGZ_16779 [Jatropha curcas]
13 Hb_000193_140 0.2461313088 - - conserved hypothetical protein [Ricinus communis]
14 Hb_005408_060 0.2527181723 - - PREDICTED: uncharacterized protein LOC105648045 isoform X1 [Jatropha curcas]
15 Hb_081517_010 0.2561634413 - - PREDICTED: putative potassium transporter 12 isoform X2 [Jatropha curcas]
16 Hb_008494_050 0.2578770159 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO1 [Jatropha curcas]
17 Hb_004097_120 0.2580011131 - - PREDICTED: TMV resistance protein N-like isoform X1 [Jatropha curcas]
18 Hb_007064_010 0.2610819034 - - PREDICTED: pentatricopeptide repeat-containing protein At5g39680 [Jatropha curcas]
19 Hb_183443_010 0.2615238119 - - PREDICTED: uncharacterized protein LOC105786773 [Gossypium raimondii]
20 Hb_005976_050 0.2620180408 - - PREDICTED: protein RALF-like 34 [Jatropha curcas]

Gene co-expression network

sample Hb_002863_120 Hb_002863_120 Hb_000206_190 Hb_000206_190 Hb_002863_120--Hb_000206_190 Hb_001711_050 Hb_001711_050 Hb_002863_120--Hb_001711_050 Hb_000853_400 Hb_000853_400 Hb_002863_120--Hb_000853_400 Hb_008778_010 Hb_008778_010 Hb_002863_120--Hb_008778_010 Hb_002035_080 Hb_002035_080 Hb_002863_120--Hb_002035_080 Hb_001882_130 Hb_001882_130 Hb_002863_120--Hb_001882_130 Hb_071869_010 Hb_071869_010 Hb_000206_190--Hb_071869_010 Hb_001050_030 Hb_001050_030 Hb_000206_190--Hb_001050_030 Hb_102632_010 Hb_102632_010 Hb_000206_190--Hb_102632_010 Hb_135442_010 Hb_135442_010 Hb_000206_190--Hb_135442_010 Hb_002154_070 Hb_002154_070 Hb_000206_190--Hb_002154_070 Hb_160715_010 Hb_160715_010 Hb_001711_050--Hb_160715_010 Hb_000928_050 Hb_000928_050 Hb_001711_050--Hb_000928_050 Hb_000256_070 Hb_000256_070 Hb_001711_050--Hb_000256_070 Hb_138462_010 Hb_138462_010 Hb_001711_050--Hb_138462_010 Hb_010534_050 Hb_010534_050 Hb_001711_050--Hb_010534_050 Hb_010427_010 Hb_010427_010 Hb_000853_400--Hb_010427_010 Hb_000270_520 Hb_000270_520 Hb_000853_400--Hb_000270_520 Hb_012738_030 Hb_012738_030 Hb_000853_400--Hb_012738_030 Hb_003449_070 Hb_003449_070 Hb_000853_400--Hb_003449_070 Hb_005976_050 Hb_005976_050 Hb_000853_400--Hb_005976_050 Hb_000212_310 Hb_000212_310 Hb_000853_400--Hb_000212_310 Hb_000334_180 Hb_000334_180 Hb_008778_010--Hb_000334_180 Hb_004899_060 Hb_004899_060 Hb_008778_010--Hb_004899_060 Hb_008778_010--Hb_002035_080 Hb_008778_010--Hb_005976_050 Hb_089206_010 Hb_089206_010 Hb_008778_010--Hb_089206_010 Hb_000566_030 Hb_000566_030 Hb_008778_010--Hb_000566_030 Hb_000193_140 Hb_000193_140 Hb_002035_080--Hb_000193_140 Hb_002035_080--Hb_135442_010 Hb_002035_090 Hb_002035_090 Hb_002035_080--Hb_002035_090 Hb_002035_080--Hb_000334_180 Hb_133748_010 Hb_133748_010 Hb_002035_080--Hb_133748_010 Hb_002478_030 Hb_002478_030 Hb_001882_130--Hb_002478_030 Hb_004097_120 Hb_004097_120 Hb_001882_130--Hb_004097_120 Hb_003939_040 Hb_003939_040 Hb_001882_130--Hb_003939_040 Hb_028472_010 Hb_028472_010 Hb_001882_130--Hb_028472_010 Hb_000635_200 Hb_000635_200 Hb_001882_130--Hb_000635_200 Hb_001221_140 Hb_001221_140 Hb_001882_130--Hb_001221_140
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.114149 0.11707 0.0410049 0.161239 0.0089868 0.197659
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.182941 0.114776 0.0679749

CAGE analysis