Hb_089206_010

Information

Type -
Description -
Location Contig89206: 12926-15517
Sequence    

Annotation

kegg
ID tcc:TCM_018915
description Malectin/receptor-like protein kinase family protein, putative
nr
ID XP_012078068.1
description PREDICTED: receptor-like protein kinase FERONIA [Jatropha curcas]
swissprot
ID Q9SCZ4
description Receptor-like protein kinase FERONIA OS=Arabidopsis thaliana GN=FER PE=1 SV=1
trembl
ID A0A067KL73
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13056 PE=3 SV=1
Gene Ontology
ID GO:0004672
description receptor-like protein kinase feronia

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_61690: 12500-12685 , PASA_asmbl_61691: 12788-12978 , PASA_asmbl_61692: 14232-15538
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_089206_010 0.0 - - PREDICTED: receptor-like protein kinase FERONIA [Jatropha curcas]
2 Hb_183443_010 0.1547862864 - - PREDICTED: uncharacterized protein LOC105786773 [Gossypium raimondii]
3 Hb_063943_010 0.1558827035 - - PREDICTED: box C/D snoRNA protein 1 [Jatropha curcas]
4 Hb_000357_120 0.1774152706 - - PREDICTED: pentatricopeptide repeat-containing protein At1g63330-like [Jatropha curcas]
5 Hb_003688_160 0.1877081838 - - Presenilin-like family protein [Populus trichocarpa]
6 Hb_052689_010 0.1912570811 - - heat shock cognate protein [Solanum commersonii]
7 Hb_004097_120 0.1963234293 - - PREDICTED: TMV resistance protein N-like isoform X1 [Jatropha curcas]
8 Hb_004899_060 0.2008824676 - - 46 kDa ketoavyl-ACP synthase [Ricinus communis]
9 Hb_146339_010 0.2057374997 - - hypothetical protein JCGZ_01613 [Jatropha curcas]
10 Hb_001882_130 0.2081738784 transcription factor TF Family: mTERF hypothetical protein VITISV_028996 [Vitis vinifera]
11 Hb_003059_010 0.2117027092 - - PREDICTED: uncharacterized protein LOC104236538 [Nicotiana sylvestris]
12 Hb_002851_080 0.2130783775 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Jatropha curcas]
13 Hb_001221_140 0.2137591256 - - DNA binding protein, putative [Ricinus communis]
14 Hb_003124_030 0.2158301339 - - At4g33625-like protein [Brassica napus]
15 Hb_008778_010 0.2175789065 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
16 Hb_006472_020 0.2186142728 - - heat shock protein [Cicer arietinum]
17 Hb_000566_030 0.2190336326 - - serine/threonine-protein kinase cx32, putative [Ricinus communis]
18 Hb_007590_070 0.2217891068 - - PREDICTED: inositol 3-kinase [Jatropha curcas]
19 Hb_000334_180 0.2251618579 - - hypothetical protein JCGZ_16779 [Jatropha curcas]
20 Hb_009367_080 0.2267575179 transcription factor TF Family: WRKY WRKY transcription factor 42 [Jatropha curcas]

Gene co-expression network

sample Hb_089206_010 Hb_089206_010 Hb_183443_010 Hb_183443_010 Hb_089206_010--Hb_183443_010 Hb_063943_010 Hb_063943_010 Hb_089206_010--Hb_063943_010 Hb_000357_120 Hb_000357_120 Hb_089206_010--Hb_000357_120 Hb_003688_160 Hb_003688_160 Hb_089206_010--Hb_003688_160 Hb_052689_010 Hb_052689_010 Hb_089206_010--Hb_052689_010 Hb_004097_120 Hb_004097_120 Hb_089206_010--Hb_004097_120 Hb_146339_010 Hb_146339_010 Hb_183443_010--Hb_146339_010 Hb_183443_010--Hb_063943_010 Hb_000566_030 Hb_000566_030 Hb_183443_010--Hb_000566_030 Hb_000334_180 Hb_000334_180 Hb_183443_010--Hb_000334_180 Hb_174473_010 Hb_174473_010 Hb_183443_010--Hb_174473_010 Hb_063943_010--Hb_146339_010 Hb_003059_010 Hb_003059_010 Hb_063943_010--Hb_003059_010 Hb_003175_110 Hb_003175_110 Hb_063943_010--Hb_003175_110 Hb_003124_030 Hb_003124_030 Hb_063943_010--Hb_003124_030 Hb_000137_020 Hb_000137_020 Hb_000357_120--Hb_000137_020 Hb_000357_120--Hb_004097_120 Hb_006185_060 Hb_006185_060 Hb_000357_120--Hb_006185_060 Hb_006472_020 Hb_006472_020 Hb_000357_120--Hb_006472_020 Hb_009367_080 Hb_009367_080 Hb_000357_120--Hb_009367_080 Hb_004899_060 Hb_004899_060 Hb_003688_160--Hb_004899_060 Hb_003688_160--Hb_052689_010 Hb_003688_160--Hb_174473_010 Hb_001242_090 Hb_001242_090 Hb_003688_160--Hb_001242_090 Hb_000251_090 Hb_000251_090 Hb_003688_160--Hb_000251_090 Hb_001916_070 Hb_001916_070 Hb_052689_010--Hb_001916_070 Hb_052689_010--Hb_000251_090 Hb_003032_020 Hb_003032_020 Hb_052689_010--Hb_003032_020 Hb_007820_010 Hb_007820_010 Hb_052689_010--Hb_007820_010 Hb_001882_130 Hb_001882_130 Hb_004097_120--Hb_001882_130 Hb_001008_170 Hb_001008_170 Hb_004097_120--Hb_001008_170 Hb_000661_110 Hb_000661_110 Hb_004097_120--Hb_000661_110 Hb_004097_120--Hb_006185_060 Hb_000479_150 Hb_000479_150 Hb_004097_120--Hb_000479_150 Hb_001221_140 Hb_001221_140 Hb_004097_120--Hb_001221_140
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
4.37888 3.01067 2.2009 2.53017 1.67509 2.37699
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0169897 0.0133691 5.96823 4.12396 3.75413

CAGE analysis