Hb_010427_010

Information

Type desease resistance
Description Gene Name: NB-ARC
Location Contig10427: 311-1297
Sequence    

Annotation

kegg
ID rcu:RCOM_0898300
description Disease resistance protein RPS5, putative (EC:3.1.3.16)
nr
ID KDP37135.1
description hypothetical protein JCGZ_06191 [Jatropha curcas]
swissprot
ID Q8RXS5
description Probable disease resistance protein At5g63020 OS=Arabidopsis thaliana GN=At5g63020 PE=2 SV=2
trembl
ID A0A067KXZ2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06191 PE=4 SV=1
Gene Ontology
ID GO:0000166
description disease resistance protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010427_010 0.0 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_06191 [Jatropha curcas]
2 Hb_006660_010 0.0998379396 - - PREDICTED: exocyst complex component EXO84C isoform X1 [Jatropha curcas]
3 Hb_003449_070 0.1155170374 transcription factor TF Family: SNF2 DNA repair helicase rad5,16, putative [Ricinus communis]
4 Hb_011310_160 0.1174218582 - - PREDICTED: RNA-dependent RNA polymerase 6-like [Jatropha curcas]
5 Hb_000212_310 0.1182987469 - - hypothetical protein JCGZ_24350 [Jatropha curcas]
6 Hb_003294_090 0.1187393918 - - conserved hypothetical protein [Ricinus communis]
7 Hb_005679_050 0.1188861563 - - ABC transporter family protein [Hevea brasiliensis]
8 Hb_000470_080 0.1192199381 - - Caldesmon, putative [Ricinus communis]
9 Hb_004224_020 0.1194827368 - - PREDICTED: uncharacterized protein LOC105643786 [Jatropha curcas]
10 Hb_000193_140 0.1200144801 - - conserved hypothetical protein [Ricinus communis]
11 Hb_005976_050 0.1226071194 - - PREDICTED: protein RALF-like 34 [Jatropha curcas]
12 Hb_000398_120 0.1231487566 - - PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3-like isoform X4 [Gossypium raimondii]
13 Hb_000544_050 0.124870825 - - PREDICTED: serine/threonine-protein kinase EDR1 [Jatropha curcas]
14 Hb_000613_080 0.1249989074 - - PREDICTED: mucin-5AC-like [Nicotiana sylvestris]
15 Hb_000574_070 0.126952487 - - PREDICTED: DEAD-box ATP-dependent RNA helicase 35 [Jatropha curcas]
16 Hb_002811_060 0.1274730511 - - PREDICTED: protein transport protein Sec24-like At4g32640 [Jatropha curcas]
17 Hb_003988_010 0.1280193424 - - PREDICTED: vacuolar-sorting receptor 3 [Jatropha curcas]
18 Hb_007803_050 0.1296971168 - - PREDICTED: uncharacterized protein LOC105129170 isoform X2 [Populus euphratica]
19 Hb_000159_100 0.1302253003 - - PREDICTED: uncharacterized protein At4g19900 isoform X2 [Jatropha curcas]
20 Hb_187953_010 0.1326313599 - - PREDICTED: type II inositol 1,4,5-trisphosphate 5-phosphatase FRA3 isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_010427_010 Hb_010427_010 Hb_006660_010 Hb_006660_010 Hb_010427_010--Hb_006660_010 Hb_003449_070 Hb_003449_070 Hb_010427_010--Hb_003449_070 Hb_011310_160 Hb_011310_160 Hb_010427_010--Hb_011310_160 Hb_000212_310 Hb_000212_310 Hb_010427_010--Hb_000212_310 Hb_003294_090 Hb_003294_090 Hb_010427_010--Hb_003294_090 Hb_005679_050 Hb_005679_050 Hb_010427_010--Hb_005679_050 Hb_007803_050 Hb_007803_050 Hb_006660_010--Hb_007803_050 Hb_006660_010--Hb_011310_160 Hb_002811_060 Hb_002811_060 Hb_006660_010--Hb_002811_060 Hb_006660_010--Hb_000212_310 Hb_007062_020 Hb_007062_020 Hb_006660_010--Hb_007062_020 Hb_000592_030 Hb_000592_030 Hb_006660_010--Hb_000592_030 Hb_000613_080 Hb_000613_080 Hb_003449_070--Hb_000613_080 Hb_000832_220 Hb_000832_220 Hb_003449_070--Hb_000832_220 Hb_001617_060 Hb_001617_060 Hb_003449_070--Hb_001617_060 Hb_000088_130 Hb_000088_130 Hb_003449_070--Hb_000088_130 Hb_000922_370 Hb_000922_370 Hb_003449_070--Hb_000922_370 Hb_174821_010 Hb_174821_010 Hb_003449_070--Hb_174821_010 Hb_000398_120 Hb_000398_120 Hb_011310_160--Hb_000398_120 Hb_003988_010 Hb_003988_010 Hb_011310_160--Hb_003988_010 Hb_025477_040 Hb_025477_040 Hb_011310_160--Hb_025477_040 Hb_010174_040 Hb_010174_040 Hb_011310_160--Hb_010174_040 Hb_002974_060 Hb_002974_060 Hb_011310_160--Hb_002974_060 Hb_002169_050 Hb_002169_050 Hb_000212_310--Hb_002169_050 Hb_007904_160 Hb_007904_160 Hb_000212_310--Hb_007904_160 Hb_002909_140 Hb_002909_140 Hb_000212_310--Hb_002909_140 Hb_000212_380 Hb_000212_380 Hb_000212_310--Hb_000212_380 Hb_004676_010 Hb_004676_010 Hb_000212_310--Hb_004676_010 Hb_003253_040 Hb_003253_040 Hb_003294_090--Hb_003253_040 Hb_005901_020 Hb_005901_020 Hb_003294_090--Hb_005901_020 Hb_002740_110 Hb_002740_110 Hb_003294_090--Hb_002740_110 Hb_010174_110 Hb_010174_110 Hb_003294_090--Hb_010174_110 Hb_015175_020 Hb_015175_020 Hb_003294_090--Hb_015175_020 Hb_002063_020 Hb_002063_020 Hb_003294_090--Hb_002063_020 Hb_002493_020 Hb_002493_020 Hb_005679_050--Hb_002493_020 Hb_001700_040 Hb_001700_040 Hb_005679_050--Hb_001700_040 Hb_005679_050--Hb_001617_060 Hb_003966_030 Hb_003966_030 Hb_005679_050--Hb_003966_030 Hb_067345_010 Hb_067345_010 Hb_005679_050--Hb_067345_010 Hb_001691_120 Hb_001691_120 Hb_005679_050--Hb_001691_120
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.82266 2.1887 1.04651 2.70811 2.60029 5.25161
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.824162 0.931777 4.24668 4.23721 2.23558

CAGE analysis