Hb_000088_130

Information

Type -
Description -
Location Contig88: 177687-191551
Sequence    

Annotation

kegg
ID rcu:RCOM_1333440
description phosphoinositide 5-phosphatase, putative
nr
ID KDP42390.1
description hypothetical protein JCGZ_02447 [Jatropha curcas]
swissprot
ID Q7XZU3
description Phosphoinositide phosphatase SAC1 OS=Arabidopsis thaliana GN=SAC1 PE=1 SV=1
trembl
ID A0A067LD16
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02447 PE=4 SV=1
Gene Ontology
ID GO:0043813
description phosphoinositide phosphatase sac1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_61384: 181377-185268
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000088_130 0.0 - - hypothetical protein JCGZ_02447 [Jatropha curcas]
2 Hb_004627_060 0.0646342295 - - PREDICTED: ethylene receptor isoform X2 [Jatropha curcas]
3 Hb_000375_130 0.0707549342 - - Leucine-rich repeat transmembrane protein kinase family protein isoform 1 [Theobroma cacao]
4 Hb_174821_010 0.072555379 - - PREDICTED: ubiquitin carboxyl-terminal hydrolase 14 [Jatropha curcas]
5 Hb_002107_070 0.0726419962 - - hypothetical protein RCOM_1598630 [Ricinus communis]
6 Hb_001454_280 0.0788320814 - - PREDICTED: chaperone protein dnaJ 49 [Jatropha curcas]
7 Hb_002301_080 0.0801149018 transcription factor TF Family: HB PREDICTED: uncharacterized protein LOC105649589 isoform X2 [Jatropha curcas]
8 Hb_010053_030 0.0803855567 - - PREDICTED: tRNA (cytosine(34)-C(5))-methyltransferase [Jatropha curcas]
9 Hb_003449_070 0.081147607 transcription factor TF Family: SNF2 DNA repair helicase rad5,16, putative [Ricinus communis]
10 Hb_005321_020 0.0825786903 - - splicing factor-related family protein [Populus trichocarpa]
11 Hb_002329_040 0.0826307079 - - PREDICTED: uncharacterized protein LOC105648065 [Jatropha curcas]
12 Hb_000307_210 0.0834588273 - - Transportin 1 isoform 1 [Theobroma cacao]
13 Hb_000417_160 0.0858296841 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At5g45780 [Jatropha curcas]
14 Hb_000836_270 0.0866503804 - - PREDICTED: mitogen-activated protein kinase homolog MMK2 [Jatropha curcas]
15 Hb_019153_020 0.0867005527 - - PREDICTED: KH domain-containing protein At4g18375 isoform X2 [Jatropha curcas]
16 Hb_001140_350 0.0882147508 - - PREDICTED: uncharacterized protein LOC105648465 [Jatropha curcas]
17 Hb_104061_020 0.0891893195 - - PREDICTED: UV-stimulated scaffold protein A homolog [Jatropha curcas]
18 Hb_000856_140 0.0894199103 - - PREDICTED: uncharacterized protein LOC105640478 isoform X1 [Jatropha curcas]
19 Hb_000510_310 0.090427993 transcription factor TF Family: bHLH PREDICTED: transcription factor UNE12-like [Jatropha curcas]
20 Hb_006252_020 0.0915024741 - - PREDICTED: SET and MYND domain-containing protein 4 isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_000088_130 Hb_000088_130 Hb_004627_060 Hb_004627_060 Hb_000088_130--Hb_004627_060 Hb_000375_130 Hb_000375_130 Hb_000088_130--Hb_000375_130 Hb_174821_010 Hb_174821_010 Hb_000088_130--Hb_174821_010 Hb_002107_070 Hb_002107_070 Hb_000088_130--Hb_002107_070 Hb_001454_280 Hb_001454_280 Hb_000088_130--Hb_001454_280 Hb_002301_080 Hb_002301_080 Hb_000088_130--Hb_002301_080 Hb_004627_060--Hb_002107_070 Hb_000856_140 Hb_000856_140 Hb_004627_060--Hb_000856_140 Hb_104061_020 Hb_104061_020 Hb_004627_060--Hb_104061_020 Hb_007635_030 Hb_007635_030 Hb_004627_060--Hb_007635_030 Hb_002329_040 Hb_002329_040 Hb_004627_060--Hb_002329_040 Hb_015099_010 Hb_015099_010 Hb_000375_130--Hb_015099_010 Hb_002392_030 Hb_002392_030 Hb_000375_130--Hb_002392_030 Hb_133047_010 Hb_133047_010 Hb_000375_130--Hb_133047_010 Hb_009112_010 Hb_009112_010 Hb_000375_130--Hb_009112_010 Hb_000375_130--Hb_174821_010 Hb_000470_070 Hb_000470_070 Hb_174821_010--Hb_000470_070 Hb_002078_100 Hb_002078_100 Hb_174821_010--Hb_002078_100 Hb_000648_100 Hb_000648_100 Hb_174821_010--Hb_000648_100 Hb_000613_080 Hb_000613_080 Hb_174821_010--Hb_000613_080 Hb_001617_060 Hb_001617_060 Hb_174821_010--Hb_001617_060 Hb_003966_030 Hb_003966_030 Hb_174821_010--Hb_003966_030 Hb_002107_070--Hb_104061_020 Hb_002107_070--Hb_002329_040 Hb_000369_130 Hb_000369_130 Hb_002107_070--Hb_000369_130 Hb_001821_090 Hb_001821_090 Hb_002107_070--Hb_001821_090 Hb_028487_010 Hb_028487_010 Hb_002107_070--Hb_028487_010 Hb_002107_070--Hb_007635_030 Hb_001140_350 Hb_001140_350 Hb_001454_280--Hb_001140_350 Hb_002174_020 Hb_002174_020 Hb_001454_280--Hb_002174_020 Hb_001454_280--Hb_007635_030 Hb_006252_020 Hb_006252_020 Hb_001454_280--Hb_006252_020 Hb_008112_030 Hb_008112_030 Hb_001454_280--Hb_008112_030 Hb_003680_150 Hb_003680_150 Hb_001454_280--Hb_003680_150 Hb_116929_010 Hb_116929_010 Hb_002301_080--Hb_116929_010 Hb_003044_020 Hb_003044_020 Hb_002301_080--Hb_003044_020 Hb_117552_010 Hb_117552_010 Hb_002301_080--Hb_117552_010 Hb_002301_080--Hb_133047_010 Hb_002400_240 Hb_002400_240 Hb_002301_080--Hb_002400_240 Hb_000320_200 Hb_000320_200 Hb_002301_080--Hb_000320_200
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
4.75956 3.67162 1.7492 2.18221 4.61856 4.09889
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.55023 1.15277 2.61274 4.0879 1.88709

CAGE analysis