Hb_015099_010

Information

Type -
Description -
Location Contig15099: 10805-21251
Sequence    

Annotation

kegg
ID rcu:RCOM_0624110
description neutral alpha-glucosidase ab precursor, putative (EC:3.2.1.84)
nr
ID XP_012088175.1
description PREDICTED: probable glucan 1,3-alpha-glucosidase [Jatropha curcas]
swissprot
ID Q9FN05
description Probable glucan 1,3-alpha-glucosidase OS=Arabidopsis thaliana GN=PSL5 PE=1 SV=1
trembl
ID A0A067JXK8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26689 PE=3 SV=1
Gene Ontology
ID GO:0005783
description probable glucan -alpha-glucosidase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_12734: 10879-21171 , PASA_asmbl_12735: 18169-18450
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_015099_010 0.0 - - PREDICTED: probable glucan 1,3-alpha-glucosidase [Jatropha curcas]
2 Hb_000375_130 0.0593904482 - - Leucine-rich repeat transmembrane protein kinase family protein isoform 1 [Theobroma cacao]
3 Hb_000832_220 0.0613300991 - - PREDICTED: uncharacterized protein LOC105641576 isoform X1 [Jatropha curcas]
4 Hb_003029_130 0.0632813329 - - carboxypeptidase regulatory region-containingprotein, putative [Ricinus communis]
5 Hb_002392_030 0.0712355256 - - WD-40 repeat family protein / small nuclear ribonucleoprotein Prp4p-related [Theobroma cacao]
6 Hb_003124_130 0.0721139201 - - PREDICTED: KH domain-containing protein At4g18375 isoform X1 [Jatropha curcas]
7 Hb_000209_070 0.072643049 - - PREDICTED: chloride channel protein CLC-f isoform X1 [Jatropha curcas]
8 Hb_001473_090 0.0754921019 - - PREDICTED: uncharacterized protein LOC105650374 [Jatropha curcas]
9 Hb_174821_010 0.0762612601 - - PREDICTED: ubiquitin carboxyl-terminal hydrolase 14 [Jatropha curcas]
10 Hb_002066_080 0.0795761777 - - PREDICTED: protein CYPRO4 [Jatropha curcas]
11 Hb_000158_130 0.084171501 - - PREDICTED: uncharacterized protein LOC105647950 isoform X1 [Jatropha curcas]
12 Hb_117552_010 0.0870310007 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
13 Hb_000160_290 0.0890642071 - - unnamed protein product [Vitis vinifera]
14 Hb_133047_010 0.0899408432 - - xanthine dehydrogenase, putative [Ricinus communis]
15 Hb_000785_040 0.0912649566 - - PREDICTED: uncharacterized protein LOC105628919 [Jatropha curcas]
16 Hb_000347_130 0.0913645364 - - PREDICTED: nuclear pore complex protein NUP107 [Jatropha curcas]
17 Hb_030627_060 0.0920765016 - - PREDICTED: calcium-transporting ATPase 1, endoplasmic reticulum-type-like [Jatropha curcas]
18 Hb_000487_220 0.0930827486 - - eukaryotic translation elongation factor, putative [Ricinus communis]
19 Hb_005731_090 0.0932842841 - - PREDICTED: uncharacterized protein LOC105630164 [Jatropha curcas]
20 Hb_004970_160 0.0934588087 - - PREDICTED: THO complex subunit 5B-like isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_015099_010 Hb_015099_010 Hb_000375_130 Hb_000375_130 Hb_015099_010--Hb_000375_130 Hb_000832_220 Hb_000832_220 Hb_015099_010--Hb_000832_220 Hb_003029_130 Hb_003029_130 Hb_015099_010--Hb_003029_130 Hb_002392_030 Hb_002392_030 Hb_015099_010--Hb_002392_030 Hb_003124_130 Hb_003124_130 Hb_015099_010--Hb_003124_130 Hb_000209_070 Hb_000209_070 Hb_015099_010--Hb_000209_070 Hb_000088_130 Hb_000088_130 Hb_000375_130--Hb_000088_130 Hb_000375_130--Hb_002392_030 Hb_133047_010 Hb_133047_010 Hb_000375_130--Hb_133047_010 Hb_009112_010 Hb_009112_010 Hb_000375_130--Hb_009112_010 Hb_174821_010 Hb_174821_010 Hb_000375_130--Hb_174821_010 Hb_003449_070 Hb_003449_070 Hb_000832_220--Hb_003449_070 Hb_117552_010 Hb_117552_010 Hb_000832_220--Hb_117552_010 Hb_000832_220--Hb_000375_130 Hb_000613_080 Hb_000613_080 Hb_000832_220--Hb_000613_080 Hb_000832_220--Hb_174821_010 Hb_000487_220 Hb_000487_220 Hb_003029_130--Hb_000487_220 Hb_001473_090 Hb_001473_090 Hb_003029_130--Hb_001473_090 Hb_000935_090 Hb_000935_090 Hb_003029_130--Hb_000935_090 Hb_001178_150 Hb_001178_150 Hb_003029_130--Hb_001178_150 Hb_010925_020 Hb_010925_020 Hb_003029_130--Hb_010925_020 Hb_002392_030--Hb_133047_010 Hb_002066_080 Hb_002066_080 Hb_002392_030--Hb_002066_080 Hb_004629_010 Hb_004629_010 Hb_002392_030--Hb_004629_010 Hb_148909_030 Hb_148909_030 Hb_002392_030--Hb_148909_030 Hb_004659_080 Hb_004659_080 Hb_002392_030--Hb_004659_080 Hb_000567_010 Hb_000567_010 Hb_003124_130--Hb_000567_010 Hb_000796_190 Hb_000796_190 Hb_003124_130--Hb_000796_190 Hb_147737_010 Hb_147737_010 Hb_003124_130--Hb_147737_010 Hb_001454_320 Hb_001454_320 Hb_003124_130--Hb_001454_320 Hb_000158_130 Hb_000158_130 Hb_003124_130--Hb_000158_130 Hb_000160_290 Hb_000160_290 Hb_003124_130--Hb_000160_290 Hb_000209_070--Hb_001473_090 Hb_022250_110 Hb_022250_110 Hb_000209_070--Hb_022250_110 Hb_000209_070--Hb_000160_290 Hb_001675_070 Hb_001675_070 Hb_000209_070--Hb_001675_070 Hb_000029_320 Hb_000029_320 Hb_000209_070--Hb_000029_320 Hb_003464_020 Hb_003464_020 Hb_000209_070--Hb_003464_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
88.2207 78.7158 41.7327 56.7966 105.085 136.503
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
22.3315 21.2865 40.6188 65.3001 44.1492

CAGE analysis