Hb_071869_010

Information

Type -
Description -
Location Contig71869: 338-3037
Sequence    

Annotation

kegg
ID rcu:RCOM_0656430
description hypothetical protein
nr
ID XP_012065159.1
description PREDICTED: uncharacterized protein LOC105628378 isoform X2 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LGZ4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20845 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_071869_010 0.0 - - PREDICTED: uncharacterized protein LOC105628378 isoform X2 [Jatropha curcas]
2 Hb_000206_190 0.1444974011 - - PREDICTED: F-box/LRR-repeat protein At4g14103-like [Pyrus x bretschneideri]
3 Hb_002154_070 0.1590418177 desease resistance Gene Name: AAA_25 hypothetical protein Csa_6G014750 [Cucumis sativus]
4 Hb_000928_050 0.2084050984 - - PREDICTED: DNA polymerase delta subunit 4 [Jatropha curcas]
5 Hb_024272_010 0.2136639634 - - PREDICTED: uncharacterized protein LOC104213140 [Nicotiana sylvestris]
6 Hb_010317_030 0.2272651356 - - unknown [Picea sitchensis]
7 Hb_000100_130 0.2286864827 - - hypothetical protein VITISV_026702 [Vitis vinifera]
8 Hb_002863_120 0.229979877 desease resistance Gene Name: AAA_17 JHL25H03.3 [Jatropha curcas]
9 Hb_001718_050 0.2310234081 - - PREDICTED: putative ribonuclease H protein At1g65750 [Brassica rapa]
10 Hb_010534_050 0.237859123 - - PREDICTED: 40S ribosomal protein S7 [Jatropha curcas]
11 Hb_135442_010 0.241589662 - - hypothetical protein CISIN_1g022501mg [Citrus sinensis]
12 Hb_000939_010 0.2425854426 - - PREDICTED: transcription factor bHLH113-like [Jatropha curcas]
13 Hb_081517_010 0.2450593126 - - PREDICTED: putative potassium transporter 12 isoform X2 [Jatropha curcas]
14 Hb_004244_010 0.2455864157 - - hypothetical protein JCGZ_06191 [Jatropha curcas]
15 Hb_029921_020 0.2460211888 - - PREDICTED: putative transferase CAF17 homolog, mitochondrial [Jatropha curcas]
16 Hb_001606_080 0.2498393031 - - PREDICTED: BTB/POZ domain-containing protein At2g04740 isoform X2 [Jatropha curcas]
17 Hb_000850_050 0.253879442 - - PREDICTED: pentatricopeptide repeat-containing protein At1g63330-like [Jatropha curcas]
18 Hb_007810_100 0.2554522665 - - Synaptic glycoprotein SC2, putative [Ricinus communis]
19 Hb_028912_040 0.2567512815 - - hypothetical protein POPTR_0016s03250g [Populus trichocarpa]
20 Hb_000415_060 0.2572515028 - - PREDICTED: mitochondrial import inner membrane translocase subunit tim16 [Jatropha curcas]

Gene co-expression network

sample Hb_071869_010 Hb_071869_010 Hb_000206_190 Hb_000206_190 Hb_071869_010--Hb_000206_190 Hb_002154_070 Hb_002154_070 Hb_071869_010--Hb_002154_070 Hb_000928_050 Hb_000928_050 Hb_071869_010--Hb_000928_050 Hb_024272_010 Hb_024272_010 Hb_071869_010--Hb_024272_010 Hb_010317_030 Hb_010317_030 Hb_071869_010--Hb_010317_030 Hb_000100_130 Hb_000100_130 Hb_071869_010--Hb_000100_130 Hb_001050_030 Hb_001050_030 Hb_000206_190--Hb_001050_030 Hb_102632_010 Hb_102632_010 Hb_000206_190--Hb_102632_010 Hb_135442_010 Hb_135442_010 Hb_000206_190--Hb_135442_010 Hb_000206_190--Hb_002154_070 Hb_002863_120 Hb_002863_120 Hb_000206_190--Hb_002863_120 Hb_001718_050 Hb_001718_050 Hb_002154_070--Hb_001718_050 Hb_004244_010 Hb_004244_010 Hb_002154_070--Hb_004244_010 Hb_002154_070--Hb_001050_030 Hb_028912_040 Hb_028912_040 Hb_002154_070--Hb_028912_040 Hb_001711_050 Hb_001711_050 Hb_000928_050--Hb_001711_050 Hb_000928_050--Hb_002154_070 Hb_010534_050 Hb_010534_050 Hb_000928_050--Hb_010534_050 Hb_006960_010 Hb_006960_010 Hb_000928_050--Hb_006960_010 Hb_141296_010 Hb_141296_010 Hb_000928_050--Hb_141296_010 Hb_024272_010--Hb_010317_030 Hb_007827_020 Hb_007827_020 Hb_024272_010--Hb_007827_020 Hb_007810_100 Hb_007810_100 Hb_024272_010--Hb_007810_100 Hb_012725_100 Hb_012725_100 Hb_024272_010--Hb_012725_100 Hb_003106_010 Hb_003106_010 Hb_024272_010--Hb_003106_010 Hb_010317_030--Hb_007827_020 Hb_007603_010 Hb_007603_010 Hb_010317_030--Hb_007603_010 Hb_005656_060 Hb_005656_060 Hb_010317_030--Hb_005656_060 Hb_001983_010 Hb_001983_010 Hb_010317_030--Hb_001983_010 Hb_004374_080 Hb_004374_080 Hb_000100_130--Hb_004374_080 Hb_012404_070 Hb_012404_070 Hb_000100_130--Hb_012404_070 Hb_000100_130--Hb_007810_100 Hb_018954_020 Hb_018954_020 Hb_000100_130--Hb_018954_020 Hb_010925_020 Hb_010925_020 Hb_000100_130--Hb_010925_020 Hb_000850_050 Hb_000850_050 Hb_000100_130--Hb_000850_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.56931 0.691063 0.885896 1.29132 0.355052 5.31488
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.086304 0 1.9521 1.18412 1.54084

CAGE analysis