Hb_060458_010

Information

Type -
Description -
Location Contig60458: 366-1496
Sequence    

Annotation

kegg
ID rcu:RCOM_0626470
description hypothetical protein
nr
ID XP_002526794.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID O80624
description Probable membrane-associated kinase regulator 4 OS=Arabidopsis thaliana GN=MAKR4 PE=3 SV=1
trembl
ID B9SLC5
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0626470 PE=4 SV=1
Gene Ontology
ID GO:0009506
description probable membrane-associated kinase regulator 4

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_060458_010 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_141296_010 0.1702009413 - - -
3 Hb_002126_020 0.1890963735 - - ferrochelatase [Medicago truncatula]
4 Hb_006422_030 0.1935818573 - - -
5 Hb_000082_020 0.202290442 - - -
6 Hb_005318_020 0.2067239446 - - PREDICTED: lecithin-cholesterol acyltransferase-like 4 isoform X3 [Jatropha curcas]
7 Hb_114079_010 0.2067878008 - - hypothetical protein CICLE_v10008147mg [Citrus clementina]
8 Hb_003030_040 0.2105446014 - - hypothetical protein CISIN_1g0466212mg, partial [Citrus sinensis]
9 Hb_000340_330 0.2129740243 - - PREDICTED: probable indole-3-acetic acid-amido synthetase GH3.6 [Jatropha curcas]
10 Hb_000683_090 0.2151968133 - - stress enhanced protein [Medicago truncatula]
11 Hb_046120_010 0.2222194955 - - -
12 Hb_138462_010 0.2272171197 - - PREDICTED: SUMO-conjugating enzyme UBC9-A-like isoform X1 [Elaeis guineensis]
13 Hb_094437_040 0.2291306775 - - ankyrin repeat family protein, partial [Manihot esculenta]
14 Hb_005271_230 0.2310107725 - - PREDICTED: uncharacterized protein LOC105645849 isoform X4 [Jatropha curcas]
15 Hb_000098_300 0.2359474732 - - -
16 Hb_103093_010 0.2379494711 - - PREDICTED: wall-associated receptor kinase 4-like [Elaeis guineensis]
17 Hb_031866_050 0.2393643898 - - PREDICTED: uncharacterized protein LOC101756357 [Setaria italica]
18 Hb_001050_060 0.2404518672 - - hypothetical protein POPTR_0011s036602g, partial [Populus trichocarpa]
19 Hb_041025_010 0.242008656 - - PREDICTED: uncharacterized protein LOC105635593 [Jatropha curcas]
20 Hb_007447_020 0.2438965136 - - hypothetical protein CISIN_1g038065mg [Citrus sinensis]

Gene co-expression network

sample Hb_060458_010 Hb_060458_010 Hb_141296_010 Hb_141296_010 Hb_060458_010--Hb_141296_010 Hb_002126_020 Hb_002126_020 Hb_060458_010--Hb_002126_020 Hb_006422_030 Hb_006422_030 Hb_060458_010--Hb_006422_030 Hb_000082_020 Hb_000082_020 Hb_060458_010--Hb_000082_020 Hb_005318_020 Hb_005318_020 Hb_060458_010--Hb_005318_020 Hb_114079_010 Hb_114079_010 Hb_060458_010--Hb_114079_010 Hb_000098_300 Hb_000098_300 Hb_141296_010--Hb_000098_300 Hb_138462_010 Hb_138462_010 Hb_141296_010--Hb_138462_010 Hb_060391_010 Hb_060391_010 Hb_141296_010--Hb_060391_010 Hb_007333_040 Hb_007333_040 Hb_141296_010--Hb_007333_040 Hb_006960_010 Hb_006960_010 Hb_141296_010--Hb_006960_010 Hb_003025_060 Hb_003025_060 Hb_002126_020--Hb_003025_060 Hb_106873_020 Hb_106873_020 Hb_002126_020--Hb_106873_020 Hb_005723_070 Hb_005723_070 Hb_002126_020--Hb_005723_070 Hb_000876_010 Hb_000876_010 Hb_002126_020--Hb_000876_010 Hb_000193_030 Hb_000193_030 Hb_002126_020--Hb_000193_030 Hb_005271_230 Hb_005271_230 Hb_006422_030--Hb_005271_230 Hb_006422_030--Hb_060391_010 Hb_094437_040 Hb_094437_040 Hb_006422_030--Hb_094437_040 Hb_050034_010 Hb_050034_010 Hb_006422_030--Hb_050034_010 Hb_001059_140 Hb_001059_140 Hb_006422_030--Hb_001059_140 Hb_041025_010 Hb_041025_010 Hb_000082_020--Hb_041025_010 Hb_000082_020--Hb_114079_010 Hb_046120_010 Hb_046120_010 Hb_000082_020--Hb_046120_010 Hb_007083_020 Hb_007083_020 Hb_000082_020--Hb_007083_020 Hb_183522_010 Hb_183522_010 Hb_000082_020--Hb_183522_010 Hb_106415_010 Hb_106415_010 Hb_000082_020--Hb_106415_010 Hb_079978_010 Hb_079978_010 Hb_005318_020--Hb_079978_010 Hb_007083_050 Hb_007083_050 Hb_005318_020--Hb_007083_050 Hb_007447_020 Hb_007447_020 Hb_005318_020--Hb_007447_020 Hb_000683_090 Hb_000683_090 Hb_005318_020--Hb_000683_090 Hb_169170_010 Hb_169170_010 Hb_005318_020--Hb_169170_010 Hb_000084_130 Hb_000084_130 Hb_005318_020--Hb_000084_130 Hb_114079_010--Hb_183522_010 Hb_114079_010--Hb_041025_010 Hb_003030_040 Hb_003030_040 Hb_114079_010--Hb_003030_040 Hb_025905_020 Hb_025905_020 Hb_114079_010--Hb_025905_020 Hb_010964_020 Hb_010964_020 Hb_114079_010--Hb_010964_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.102183 0.188229 0.173756 1.63135 0.119764 2.5456
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.168351 0.241807 0.28046

CAGE analysis