Hb_114079_010

Information

Type -
Description -
Location Contig114079: 796-1065
Sequence    

Annotation

kegg
ID cic:CICLE_v10008147mg
description hypothetical protein
nr
ID XP_006453458.1
description hypothetical protein CICLE_v10008147mg [Citrus clementina]
swissprot
ID Q1PDI2
description Diacylglycerol kinase 4 OS=Arabidopsis thaliana GN=DGK4 PE=2 SV=1
trembl
ID V4U1L5
description Uncharacterized protein OS=Citrus clementina GN=CICLE_v10008147mg PE=4 SV=1
Gene Ontology
ID GO:0004143
description diacylglycerol kinase family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_114079_010 0.0 - - hypothetical protein CICLE_v10008147mg [Citrus clementina]
2 Hb_000082_020 0.1257546855 - - -
3 Hb_183522_010 0.152723439 - - Far upstream element-binding protein, putative [Ricinus communis]
4 Hb_041025_010 0.1616681334 - - PREDICTED: uncharacterized protein LOC105635593 [Jatropha curcas]
5 Hb_003030_040 0.1705659106 - - hypothetical protein CISIN_1g0466212mg, partial [Citrus sinensis]
6 Hb_025905_020 0.1784574237 - - major allergen Pru ar 1-like [Jatropha curcas]
7 Hb_010964_020 0.1803477708 - - RNA helicase [Arabidopsis thaliana]
8 Hb_001708_010 0.1846600313 - - PREDICTED: putative disease resistance protein At4g11170 [Malus domestica]
9 Hb_162090_010 0.1881121078 - - PREDICTED: uncharacterized protein LOC105642032 [Jatropha curcas]
10 Hb_106415_010 0.1926588124 - - PREDICTED: snRNA-activating protein complex subunit isoform X1 [Jatropha curcas]
11 Hb_108227_010 0.1946179874 - - RecName: Full=Profilin-2; AltName: Full=Pollen allergen Hev b 8.0102; AltName: Allergen=Hev b 8.0102 [Hevea brasiliensis]
12 Hb_007083_020 0.1947826053 - - hypothetical protein F775_15403 [Aegilops tauschii]
13 Hb_035436_010 0.1950258014 - - PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B-like [Populus euphratica]
14 Hb_005107_020 0.1956819779 - - hypothetical protein JCGZ_25266 [Jatropha curcas]
15 Hb_003371_170 0.195999462 - - conserved hypothetical protein [Ricinus communis]
16 Hb_022614_010 0.1985999594 - - -
17 Hb_046120_010 0.1998719883 - - -
18 Hb_033385_010 0.2020619094 - - hypothetical protein JCGZ_06094 [Jatropha curcas]
19 Hb_006162_020 0.2028554996 - - -
20 Hb_169505_010 0.2056736154 - - hypothetical protein JCGZ_04480 [Jatropha curcas]

Gene co-expression network

sample Hb_114079_010 Hb_114079_010 Hb_000082_020 Hb_000082_020 Hb_114079_010--Hb_000082_020 Hb_183522_010 Hb_183522_010 Hb_114079_010--Hb_183522_010 Hb_041025_010 Hb_041025_010 Hb_114079_010--Hb_041025_010 Hb_003030_040 Hb_003030_040 Hb_114079_010--Hb_003030_040 Hb_025905_020 Hb_025905_020 Hb_114079_010--Hb_025905_020 Hb_010964_020 Hb_010964_020 Hb_114079_010--Hb_010964_020 Hb_000082_020--Hb_041025_010 Hb_046120_010 Hb_046120_010 Hb_000082_020--Hb_046120_010 Hb_007083_020 Hb_007083_020 Hb_000082_020--Hb_007083_020 Hb_000082_020--Hb_183522_010 Hb_106415_010 Hb_106415_010 Hb_000082_020--Hb_106415_010 Hb_183522_010--Hb_007083_020 Hb_183522_010--Hb_106415_010 Hb_183522_010--Hb_010964_020 Hb_000053_030 Hb_000053_030 Hb_183522_010--Hb_000053_030 Hb_005107_020 Hb_005107_020 Hb_183522_010--Hb_005107_020 Hb_041025_010--Hb_046120_010 Hb_041025_010--Hb_183522_010 Hb_041025_010--Hb_010964_020 Hb_169505_010 Hb_169505_010 Hb_041025_010--Hb_169505_010 Hb_002815_050 Hb_002815_050 Hb_003030_040--Hb_002815_050 Hb_031866_050 Hb_031866_050 Hb_003030_040--Hb_031866_050 Hb_007188_030 Hb_007188_030 Hb_003030_040--Hb_007188_030 Hb_003656_150 Hb_003656_150 Hb_003030_040--Hb_003656_150 Hb_003030_040--Hb_005107_020 Hb_005679_070 Hb_005679_070 Hb_003030_040--Hb_005679_070 Hb_025905_020--Hb_010964_020 Hb_178620_010 Hb_178620_010 Hb_025905_020--Hb_178620_010 Hb_134488_010 Hb_134488_010 Hb_025905_020--Hb_134488_010 Hb_035436_010 Hb_035436_010 Hb_025905_020--Hb_035436_010 Hb_025905_020--Hb_041025_010 Hb_010964_020--Hb_178620_010 Hb_001623_300 Hb_001623_300 Hb_010964_020--Hb_001623_300 Hb_001623_290 Hb_001623_290 Hb_010964_020--Hb_001623_290 Hb_068569_010 Hb_068569_010 Hb_010964_020--Hb_068569_010 Hb_002192_090 Hb_002192_090 Hb_010964_020--Hb_002192_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
68.2826 122.107 114.435 674.395 27.8391 733.549
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
61.7782 34.2193 62.7742 57.9314 41.8703

CAGE analysis