Hb_143769_010

Information

Type -
Description -
Location Contig143769: 825-1872
Sequence    

Annotation

kegg
ID rcu:RCOM_0381140
description receptor protein kinase, putative
nr
ID XP_012091787.1
description PREDICTED: probable LRR receptor-like serine/threonine-protein kinase MRH1 [Jatropha curcas]
swissprot
ID C0LGQ4
description Probable LRR receptor-like serine/threonine-protein kinase MRH1 OS=Arabidopsis thaliana GN=MRH1 PE=2 SV=1
trembl
ID A0A067JM81
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21576 PE=4 SV=1
Gene Ontology
ID GO:0016021
description probable lrr receptor-like serine threonine-protein kinase mrh1 isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_143769_010 0.0 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase MRH1 [Jatropha curcas]
2 Hb_041813_080 0.2335897934 - - -
3 Hb_000245_120 0.2703215204 - - hypothetical protein POPTR_0001s18890g [Populus trichocarpa]
4 Hb_012463_010 0.2790465165 - - PREDICTED: uncharacterized protein LOC104901296 [Beta vulgaris subsp. vulgaris]
5 Hb_011478_010 0.2829622059 - - -
6 Hb_027760_030 0.2858438425 - - -
7 Hb_020763_010 0.287410187 - - polyamine oxidase, putative [Ricinus communis]
8 Hb_003711_030 0.2918785554 - - PREDICTED: uncharacterized protein LOC102621950 [Citrus sinensis]
9 Hb_012092_080 0.2926486563 - - PREDICTED: pentatricopeptide repeat-containing protein At5g15280-like [Malus domestica]
10 Hb_001523_030 0.2934874519 - - protein binding protein, putative [Ricinus communis]
11 Hb_005742_010 0.2942508169 - - hypothetical protein, partial [Pseudomonas fluorescens]
12 Hb_171685_030 0.3018430598 - - URF-1 [Citrullus lanatus]
13 Hb_142570_010 0.3047007802 - - PREDICTED: uncharacterized protein LOC104907573 [Beta vulgaris subsp. vulgaris]
14 Hb_049275_010 0.3057023093 - - PREDICTED: F-box/LRR-repeat protein 4-like [Populus euphratica]
15 Hb_041813_050 0.3066864679 - - hypothetical protein NitaMp096 [Nicotiana tabacum]
16 Hb_001304_120 0.3086871453 transcription factor TF Family: WRKY WRKY protein [Hevea brasiliensis]
17 Hb_002025_090 0.3089765775 - - unnamed protein product [Coffea canephora]
18 Hb_057451_040 0.3098505507 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
19 Hb_004212_040 0.3158446905 - - hypothetical protein PRUPE_ppa015000mg [Prunus persica]
20 Hb_002869_070 0.3173805597 - - -

Gene co-expression network

sample Hb_143769_010 Hb_143769_010 Hb_041813_080 Hb_041813_080 Hb_143769_010--Hb_041813_080 Hb_000245_120 Hb_000245_120 Hb_143769_010--Hb_000245_120 Hb_012463_010 Hb_012463_010 Hb_143769_010--Hb_012463_010 Hb_011478_010 Hb_011478_010 Hb_143769_010--Hb_011478_010 Hb_027760_030 Hb_027760_030 Hb_143769_010--Hb_027760_030 Hb_020763_010 Hb_020763_010 Hb_143769_010--Hb_020763_010 Hb_002073_110 Hb_002073_110 Hb_041813_080--Hb_002073_110 Hb_041813_080--Hb_000245_120 Hb_002534_010 Hb_002534_010 Hb_041813_080--Hb_002534_010 Hb_118034_010 Hb_118034_010 Hb_041813_080--Hb_118034_010 Hb_005742_010 Hb_005742_010 Hb_041813_080--Hb_005742_010 Hb_000245_120--Hb_005742_010 Hb_000245_120--Hb_002073_110 Hb_006040_050 Hb_006040_050 Hb_000245_120--Hb_006040_050 Hb_027010_030 Hb_027010_030 Hb_000245_120--Hb_027010_030 Hb_012092_080 Hb_012092_080 Hb_012463_010--Hb_012092_080 Hb_000414_180 Hb_000414_180 Hb_012463_010--Hb_000414_180 Hb_049365_010 Hb_049365_010 Hb_012463_010--Hb_049365_010 Hb_000454_160 Hb_000454_160 Hb_012463_010--Hb_000454_160 Hb_003938_110 Hb_003938_110 Hb_012463_010--Hb_003938_110 Hb_069147_010 Hb_069147_010 Hb_012463_010--Hb_069147_010 Hb_003711_030 Hb_003711_030 Hb_011478_010--Hb_003711_030 Hb_167183_010 Hb_167183_010 Hb_011478_010--Hb_167183_010 Hb_057451_040 Hb_057451_040 Hb_011478_010--Hb_057451_040 Hb_000268_100 Hb_000268_100 Hb_011478_010--Hb_000268_100 Hb_002025_090 Hb_002025_090 Hb_011478_010--Hb_002025_090 Hb_002122_020 Hb_002122_020 Hb_011478_010--Hb_002122_020 Hb_000656_330 Hb_000656_330 Hb_027760_030--Hb_000656_330 Hb_000381_010 Hb_000381_010 Hb_027760_030--Hb_000381_010 Hb_003030_030 Hb_003030_030 Hb_027760_030--Hb_003030_030 Hb_181026_010 Hb_181026_010 Hb_027760_030--Hb_181026_010 Hb_001008_180 Hb_001008_180 Hb_027760_030--Hb_001008_180 Hb_001142_010 Hb_001142_010 Hb_027760_030--Hb_001142_010 Hb_003197_060 Hb_003197_060 Hb_020763_010--Hb_003197_060 Hb_018609_030 Hb_018609_030 Hb_020763_010--Hb_018609_030 Hb_005511_090 Hb_005511_090 Hb_020763_010--Hb_005511_090 Hb_099990_010 Hb_099990_010 Hb_020763_010--Hb_099990_010 Hb_000216_030 Hb_000216_030 Hb_020763_010--Hb_000216_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0.0580786 0 0.0282744
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.104007 0.0469479 0.230713

CAGE analysis