Hb_020763_010

Information

Type -
Description -
Location Contig20763: 1689-3405
Sequence    

Annotation

kegg
ID rcu:RCOM_0964720
description polyamine oxidase, putative (EC:1.5.3.11)
nr
ID XP_002517783.1
description polyamine oxidase, putative [Ricinus communis]
swissprot
ID Q9FNA2
description Polyamine oxidase 1 OS=Arabidopsis thaliana GN=PAO1 PE=1 SV=1
trembl
ID B9RVL4
description Polyamine oxidase, putative OS=Ricinus communis GN=RCOM_0964720 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_020763_010 0.0 - - polyamine oxidase, putative [Ricinus communis]
2 Hb_003197_060 0.2833372533 - - hypothetical protein POPTR_0015s11900g [Populus trichocarpa]
3 Hb_143769_010 0.287410187 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase MRH1 [Jatropha curcas]
4 Hb_018609_030 0.3033531445 - - conserved hypothetical protein [Ricinus communis]
5 Hb_005511_090 0.3099784664 - - PREDICTED: probable ubiquitin-conjugating enzyme E2 C isoform X1 [Jatropha curcas]
6 Hb_099990_010 0.3104040329 - - PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 11 [Vitis vinifera]
7 Hb_000216_030 0.3152371576 - - aldehyde oxidase, putative [Ricinus communis]
8 Hb_012463_010 0.3169207506 - - PREDICTED: uncharacterized protein LOC104901296 [Beta vulgaris subsp. vulgaris]
9 Hb_012753_010 0.3212228201 - - PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]
10 Hb_000031_350 0.3250299533 - - PREDICTED: uncharacterized protein At1g32220, chloroplastic isoform X2 [Cucumis melo]
11 Hb_007037_010 0.3254744797 - - PREDICTED: malate dehydrogenase [NADP], chloroplastic [Jatropha curcas]
12 Hb_012098_190 0.3265957696 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance RPP13-like protein 1 [Jatropha curcas]
13 Hb_027760_030 0.3270870857 - - -
14 Hb_049275_010 0.3335495595 - - PREDICTED: F-box/LRR-repeat protein 4-like [Populus euphratica]
15 Hb_000783_030 0.3363770482 - - tfiif-alpha, putative [Ricinus communis]
16 Hb_044380_020 0.3382576358 - - NBS-LRR resistance protein RGH1 [Manihot esculenta]
17 Hb_002092_040 0.3406323142 - - PREDICTED: protein YLS3 [Jatropha curcas]
18 Hb_000390_030 0.3408765754 - - hypothetical protein ZEAMMB73_364791 [Zea mays]
19 Hb_021854_020 0.3413398865 - - hypothetical protein POPTR_1763s00200g, partial [Populus trichocarpa]
20 Hb_033555_020 0.3424490253 - - Uncharacterized protein TCM_003129 [Theobroma cacao]

Gene co-expression network

sample Hb_020763_010 Hb_020763_010 Hb_003197_060 Hb_003197_060 Hb_020763_010--Hb_003197_060 Hb_143769_010 Hb_143769_010 Hb_020763_010--Hb_143769_010 Hb_018609_030 Hb_018609_030 Hb_020763_010--Hb_018609_030 Hb_005511_090 Hb_005511_090 Hb_020763_010--Hb_005511_090 Hb_099990_010 Hb_099990_010 Hb_020763_010--Hb_099990_010 Hb_000216_030 Hb_000216_030 Hb_020763_010--Hb_000216_030 Hb_000920_070 Hb_000920_070 Hb_003197_060--Hb_000920_070 Hb_005439_010 Hb_005439_010 Hb_003197_060--Hb_005439_010 Hb_010810_070 Hb_010810_070 Hb_003197_060--Hb_010810_070 Hb_095835_010 Hb_095835_010 Hb_003197_060--Hb_095835_010 Hb_155556_010 Hb_155556_010 Hb_003197_060--Hb_155556_010 Hb_001780_010 Hb_001780_010 Hb_003197_060--Hb_001780_010 Hb_041813_080 Hb_041813_080 Hb_143769_010--Hb_041813_080 Hb_000245_120 Hb_000245_120 Hb_143769_010--Hb_000245_120 Hb_012463_010 Hb_012463_010 Hb_143769_010--Hb_012463_010 Hb_011478_010 Hb_011478_010 Hb_143769_010--Hb_011478_010 Hb_027760_030 Hb_027760_030 Hb_143769_010--Hb_027760_030 Hb_002092_040 Hb_002092_040 Hb_018609_030--Hb_002092_040 Hb_012071_010 Hb_012071_010 Hb_018609_030--Hb_012071_010 Hb_018609_030--Hb_155556_010 Hb_012295_020 Hb_012295_020 Hb_018609_030--Hb_012295_020 Hb_018609_030--Hb_001780_010 Hb_001304_120 Hb_001304_120 Hb_018609_030--Hb_001304_120 Hb_012753_010 Hb_012753_010 Hb_005511_090--Hb_012753_010 Hb_000608_200 Hb_000608_200 Hb_005511_090--Hb_000608_200 Hb_015978_050 Hb_015978_050 Hb_005511_090--Hb_015978_050 Hb_000054_110 Hb_000054_110 Hb_005511_090--Hb_000054_110 Hb_005731_150 Hb_005731_150 Hb_005511_090--Hb_005731_150 Hb_000236_450 Hb_000236_450 Hb_005511_090--Hb_000236_450 Hb_099990_010--Hb_000216_030 Hb_001008_180 Hb_001008_180 Hb_099990_010--Hb_001008_180 Hb_022276_020 Hb_022276_020 Hb_099990_010--Hb_022276_020 Hb_000115_010 Hb_000115_010 Hb_099990_010--Hb_000115_010 Hb_000820_050 Hb_000820_050 Hb_099990_010--Hb_000820_050 Hb_000783_030 Hb_000783_030 Hb_099990_010--Hb_000783_030 Hb_006916_190 Hb_006916_190 Hb_000216_030--Hb_006916_190 Hb_044380_020 Hb_044380_020 Hb_000216_030--Hb_044380_020 Hb_001086_030 Hb_001086_030 Hb_000216_030--Hb_001086_030 Hb_003517_010 Hb_003517_010 Hb_000216_030--Hb_003517_010 Hb_008749_090 Hb_008749_090 Hb_000216_030--Hb_008749_090 Hb_001123_010 Hb_001123_010 Hb_000216_030--Hb_001123_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0.190908 0.123684 0.0592429
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.201789 0.305341 0.444655

CAGE analysis