Hb_022276_020

Information

Type -
Description -
Location Contig22276: 5488-7165
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_022276_020 0.0 - - -
2 Hb_121461_020 0.2026835971 - - o-methyltransferase, putative [Ricinus communis]
3 Hb_000922_010 0.2247389424 - - hypothetical protein JCGZ_11488 [Jatropha curcas]
4 Hb_000653_010 0.2428185425 - - hypothetical protein CICLE_v10033238mg [Citrus clementina]
5 Hb_009732_040 0.2446767998 - - hypothetical protein POPTR_0006s04880g [Populus trichocarpa]
6 Hb_002849_150 0.2522759323 - - hypothetical protein JCGZ_14367 [Jatropha curcas]
7 Hb_036069_020 0.2577903742 - - PREDICTED: receptor protein kinase-like protein At4g34220 [Jatropha curcas]
8 Hb_008066_060 0.2611277568 - - PREDICTED: LOW QUALITY PROTEIN: subtilisin-like protease SBT1.6 [Jatropha curcas]
9 Hb_000836_480 0.2616238215 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
10 Hb_008226_020 0.2635732802 - - hypothetical protein JCGZ_03321 [Jatropha curcas]
11 Hb_050203_010 0.2637700786 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein RGA3 [Jatropha curcas]
12 Hb_000138_020 0.2637840291 - - PREDICTED: peroxidase A2-like [Jatropha curcas]
13 Hb_001004_100 0.2638977444 - - ATP binding protein, putative [Ricinus communis]
14 Hb_001123_010 0.2660387472 - - conserved hypothetical protein [Ricinus communis]
15 Hb_099990_010 0.2693684406 - - PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 11 [Vitis vinifera]
16 Hb_000216_030 0.2698794368 - - aldehyde oxidase, putative [Ricinus communis]
17 Hb_001472_110 0.2719738442 desease resistance Gene Name: TIR_2 nucleoside-triphosphatase, putative [Ricinus communis]
18 Hb_000207_340 0.2764228561 transcription factor TF Family: GRAS hypothetical protein POPTR_0013s11930g [Populus trichocarpa]
19 Hb_156499_010 0.2796160048 - - hypothetical protein JCGZ_21064 [Jatropha curcas]
20 Hb_001758_120 0.2799474714 - - unnamed protein product [Vitis vinifera]

Gene co-expression network

sample Hb_022276_020 Hb_022276_020 Hb_121461_020 Hb_121461_020 Hb_022276_020--Hb_121461_020 Hb_000922_010 Hb_000922_010 Hb_022276_020--Hb_000922_010 Hb_000653_010 Hb_000653_010 Hb_022276_020--Hb_000653_010 Hb_009732_040 Hb_009732_040 Hb_022276_020--Hb_009732_040 Hb_002849_150 Hb_002849_150 Hb_022276_020--Hb_002849_150 Hb_036069_020 Hb_036069_020 Hb_022276_020--Hb_036069_020 Hb_162557_010 Hb_162557_010 Hb_121461_020--Hb_162557_010 Hb_121461_020--Hb_000922_010 Hb_121461_020--Hb_009732_040 Hb_121461_020--Hb_002849_150 Hb_003392_030 Hb_003392_030 Hb_121461_020--Hb_003392_030 Hb_005152_010 Hb_005152_010 Hb_000922_010--Hb_005152_010 Hb_001004_100 Hb_001004_100 Hb_000922_010--Hb_001004_100 Hb_158092_060 Hb_158092_060 Hb_000922_010--Hb_158092_060 Hb_000471_080 Hb_000471_080 Hb_000922_010--Hb_000471_080 Hb_001123_010 Hb_001123_010 Hb_000922_010--Hb_001123_010 Hb_030982_060 Hb_030982_060 Hb_000922_010--Hb_030982_060 Hb_008066_060 Hb_008066_060 Hb_000653_010--Hb_008066_060 Hb_130563_010 Hb_130563_010 Hb_000653_010--Hb_130563_010 Hb_012753_190 Hb_012753_190 Hb_000653_010--Hb_012753_190 Hb_000836_480 Hb_000836_480 Hb_000653_010--Hb_000836_480 Hb_008226_020 Hb_008226_020 Hb_000653_010--Hb_008226_020 Hb_000138_020 Hb_000138_020 Hb_000653_010--Hb_000138_020 Hb_011139_010 Hb_011139_010 Hb_009732_040--Hb_011139_010 Hb_064122_010 Hb_064122_010 Hb_009732_040--Hb_064122_010 Hb_008727_030 Hb_008727_030 Hb_009732_040--Hb_008727_030 Hb_003789_020 Hb_003789_020 Hb_009732_040--Hb_003789_020 Hb_039096_010 Hb_039096_010 Hb_009732_040--Hb_039096_010 Hb_182831_020 Hb_182831_020 Hb_009732_040--Hb_182831_020 Hb_002849_150--Hb_001004_100 Hb_107201_010 Hb_107201_010 Hb_002849_150--Hb_107201_010 Hb_000135_050 Hb_000135_050 Hb_002849_150--Hb_000135_050 Hb_002849_150--Hb_000922_010 Hb_002849_150--Hb_012753_190 Hb_029510_110 Hb_029510_110 Hb_002849_150--Hb_029510_110 Hb_000911_050 Hb_000911_050 Hb_036069_020--Hb_000911_050 Hb_036069_020--Hb_130563_010 Hb_001758_120 Hb_001758_120 Hb_036069_020--Hb_001758_120 Hb_001377_010 Hb_001377_010 Hb_036069_020--Hb_001377_010 Hb_000207_340 Hb_000207_340 Hb_036069_020--Hb_000207_340 Hb_000797_030 Hb_000797_030 Hb_036069_020--Hb_000797_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.178898 0.0333794 0.0955291 0.988552 0 0.0552413
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.507639 2.96609 0.562155

CAGE analysis