Hb_121461_020

Information

Type -
Description -
Location Contig121461: 3990-4433
Sequence    

Annotation

kegg
ID rcu:RCOM_1171370
description o-methyltransferase, putative (EC:2.1.1.146)
nr
ID XP_002517832.1
description o-methyltransferase, putative [Ricinus communis]
swissprot
ID B6VJS4
description Trans-resveratrol di-O-methyltransferase OS=Vitis vinifera GN=ROMT PE=1 SV=2
trembl
ID B9RVR3
description O-methyltransferase, putative OS=Ricinus communis GN=RCOM_1171370 PE=4 SV=1
Gene Ontology
ID GO:0046983
description 6a-hydroxymaackiain methyltransferase family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_121461_020 0.0 - - o-methyltransferase, putative [Ricinus communis]
2 Hb_022276_020 0.2026835971 - - -
3 Hb_162557_010 0.2213945467 - - PREDICTED: uncharacterized protein LOC105634192 [Jatropha curcas]
4 Hb_000922_010 0.2319267132 - - hypothetical protein JCGZ_11488 [Jatropha curcas]
5 Hb_009732_040 0.2394792486 - - hypothetical protein POPTR_0006s04880g [Populus trichocarpa]
6 Hb_002849_150 0.2433031048 - - hypothetical protein JCGZ_14367 [Jatropha curcas]
7 Hb_003392_030 0.2474799969 - - conserved hypothetical protein [Ricinus communis]
8 Hb_004316_130 0.2496992139 - - PREDICTED: glutathione transferase GST 23-like, partial [Eucalyptus grandis]
9 Hb_010931_020 0.2501969803 - - Kunitz-type protease inhibitor KPI-F4 [Populus trichocarpa x Populus deltoides]
10 Hb_002475_070 0.2522384601 - - hypothetical protein POPTR_0017s02440g, partial [Populus trichocarpa]
11 Hb_003893_100 0.2525168692 - - PREDICTED: uncharacterized protein LOC105648774 [Jatropha curcas]
12 Hb_001360_060 0.2531811881 - - PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 32 [Jatropha curcas]
13 Hb_000297_180 0.2534621966 - - Desacetoxyvindoline 4-hydroxylase, putative [Ricinus communis]
14 Hb_144783_010 0.2537168136 - - glutathione s-transferase, putative [Ricinus communis]
15 Hb_000836_480 0.2578956534 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
16 Hb_050203_010 0.2581434021 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein RGA3 [Jatropha curcas]
17 Hb_000143_020 0.2586699489 - - PREDICTED: isoflavone 2'-hydroxylase-like [Jatropha curcas]
18 Hb_003097_200 0.2605574946 - - conserved hypothetical protein [Ricinus communis]
19 Hb_000797_030 0.2609489624 - - PREDICTED: leucoanthocyanidin dioxygenase [Jatropha curcas]
20 Hb_012368_080 0.2613265888 - - PREDICTED: uncharacterized protein LOC105126277 [Populus euphratica]

Gene co-expression network

sample Hb_121461_020 Hb_121461_020 Hb_022276_020 Hb_022276_020 Hb_121461_020--Hb_022276_020 Hb_162557_010 Hb_162557_010 Hb_121461_020--Hb_162557_010 Hb_000922_010 Hb_000922_010 Hb_121461_020--Hb_000922_010 Hb_009732_040 Hb_009732_040 Hb_121461_020--Hb_009732_040 Hb_002849_150 Hb_002849_150 Hb_121461_020--Hb_002849_150 Hb_003392_030 Hb_003392_030 Hb_121461_020--Hb_003392_030 Hb_022276_020--Hb_000922_010 Hb_000653_010 Hb_000653_010 Hb_022276_020--Hb_000653_010 Hb_022276_020--Hb_009732_040 Hb_022276_020--Hb_002849_150 Hb_036069_020 Hb_036069_020 Hb_022276_020--Hb_036069_020 Hb_000297_180 Hb_000297_180 Hb_162557_010--Hb_000297_180 Hb_012368_080 Hb_012368_080 Hb_162557_010--Hb_012368_080 Hb_000347_530 Hb_000347_530 Hb_162557_010--Hb_000347_530 Hb_002521_010 Hb_002521_010 Hb_162557_010--Hb_002521_010 Hb_028008_010 Hb_028008_010 Hb_162557_010--Hb_028008_010 Hb_000513_100 Hb_000513_100 Hb_162557_010--Hb_000513_100 Hb_005152_010 Hb_005152_010 Hb_000922_010--Hb_005152_010 Hb_001004_100 Hb_001004_100 Hb_000922_010--Hb_001004_100 Hb_158092_060 Hb_158092_060 Hb_000922_010--Hb_158092_060 Hb_000471_080 Hb_000471_080 Hb_000922_010--Hb_000471_080 Hb_001123_010 Hb_001123_010 Hb_000922_010--Hb_001123_010 Hb_030982_060 Hb_030982_060 Hb_000922_010--Hb_030982_060 Hb_011139_010 Hb_011139_010 Hb_009732_040--Hb_011139_010 Hb_064122_010 Hb_064122_010 Hb_009732_040--Hb_064122_010 Hb_008727_030 Hb_008727_030 Hb_009732_040--Hb_008727_030 Hb_003789_020 Hb_003789_020 Hb_009732_040--Hb_003789_020 Hb_039096_010 Hb_039096_010 Hb_009732_040--Hb_039096_010 Hb_182831_020 Hb_182831_020 Hb_009732_040--Hb_182831_020 Hb_002849_150--Hb_001004_100 Hb_107201_010 Hb_107201_010 Hb_002849_150--Hb_107201_010 Hb_000135_050 Hb_000135_050 Hb_002849_150--Hb_000135_050 Hb_002849_150--Hb_000922_010 Hb_012753_190 Hb_012753_190 Hb_002849_150--Hb_012753_190 Hb_029510_110 Hb_029510_110 Hb_002849_150--Hb_029510_110 Hb_026650_010 Hb_026650_010 Hb_003392_030--Hb_026650_010 Hb_035583_010 Hb_035583_010 Hb_003392_030--Hb_035583_010 Hb_032621_010 Hb_032621_010 Hb_003392_030--Hb_032621_010 Hb_001936_030 Hb_001936_030 Hb_003392_030--Hb_001936_030 Hb_003166_020 Hb_003166_020 Hb_003392_030--Hb_003166_020 Hb_050898_020 Hb_050898_020 Hb_003392_030--Hb_050898_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.108409 0.917637 0.0656993 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.425657 2.93715 0.234315

CAGE analysis