Hb_000471_080

Information

Type -
Description -
Location Contig471: 140504-141973
Sequence    

Annotation

kegg
ID rcu:RCOM_0853500
description ATP binding protein, putative
nr
ID XP_012082696.1
description PREDICTED: probable mitochondrial chaperone BCS1-A [Jatropha curcas]
swissprot
ID Q54DY9
description Probable mitochondrial chaperone BCS1-B OS=Dictyostelium discoideum GN=bcsl1b PE=3 SV=1
trembl
ID A0A067LL41
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09704 PE=3 SV=1
Gene Ontology
ID GO:0005524
description probable mitochondrial chaperone bcs1-b

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000471_080 0.0 - - PREDICTED: probable mitochondrial chaperone BCS1-A [Jatropha curcas]
2 Hb_029510_110 0.1581882171 - - PREDICTED: protein PLANT CADMIUM RESISTANCE 8-like [Jatropha curcas]
3 Hb_000614_180 0.1672589899 - - -
4 Hb_001366_250 0.1772057048 - - PREDICTED: mannan endo-1,4-beta-mannosidase 4-like [Jatropha curcas]
5 Hb_005000_310 0.1791082335 - - PREDICTED: uncharacterized protein LOC105637900 [Jatropha curcas]
6 Hb_158092_060 0.1806378833 - - aspartate semialdehyde dehydrogenase, putative [Ricinus communis]
7 Hb_000140_190 0.183335146 - - acc synthase, putative [Ricinus communis]
8 Hb_001104_200 0.1885210622 - - Phytosulfokine 3 precursor, putative [Theobroma cacao]
9 Hb_061195_010 0.1892437258 - - Galactose oxidase precursor, putative [Ricinus communis]
10 Hb_000934_170 0.1894185412 - - alcohol dehydrogenase, putative [Ricinus communis]
11 Hb_000056_220 0.1911714019 - - PREDICTED: HVA22-like protein c [Jatropha curcas]
12 Hb_000204_030 0.1933382979 - - PREDICTED: TMV resistance protein N-like [Jatropha curcas]
13 Hb_000922_010 0.1944336889 - - hypothetical protein JCGZ_11488 [Jatropha curcas]
14 Hb_000256_100 0.1961729868 transcription factor TF Family: ERF PPLZ02 family protein [Populus trichocarpa]
15 Hb_005000_040 0.1972353401 - - ACC oxidase ACCO2 [Manihot esculenta]
16 Hb_002057_010 0.1973689202 - - cinnamoyl-CoA reductase, putative [Ricinus communis]
17 Hb_001268_330 0.1975057691 - - Anthranilate N-benzoyltransferase protein, putative [Ricinus communis]
18 Hb_107201_010 0.2039551473 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_26658 [Jatropha curcas]
19 Hb_148435_010 0.2044663886 - - glutathione s-transferase, putative [Ricinus communis]
20 Hb_000739_130 0.2066494406 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_000471_080 Hb_000471_080 Hb_029510_110 Hb_029510_110 Hb_000471_080--Hb_029510_110 Hb_000614_180 Hb_000614_180 Hb_000471_080--Hb_000614_180 Hb_001366_250 Hb_001366_250 Hb_000471_080--Hb_001366_250 Hb_005000_310 Hb_005000_310 Hb_000471_080--Hb_005000_310 Hb_158092_060 Hb_158092_060 Hb_000471_080--Hb_158092_060 Hb_000140_190 Hb_000140_190 Hb_000471_080--Hb_000140_190 Hb_001104_200 Hb_001104_200 Hb_029510_110--Hb_001104_200 Hb_061195_010 Hb_061195_010 Hb_029510_110--Hb_061195_010 Hb_000204_030 Hb_000204_030 Hb_029510_110--Hb_000204_030 Hb_000563_610 Hb_000563_610 Hb_029510_110--Hb_000563_610 Hb_029510_110--Hb_001366_250 Hb_012239_080 Hb_012239_080 Hb_029510_110--Hb_012239_080 Hb_000614_180--Hb_005000_310 Hb_002475_070 Hb_002475_070 Hb_000614_180--Hb_002475_070 Hb_148435_010 Hb_148435_010 Hb_000614_180--Hb_148435_010 Hb_000297_180 Hb_000297_180 Hb_000614_180--Hb_000297_180 Hb_002521_010 Hb_002521_010 Hb_000614_180--Hb_002521_010 Hb_000347_530 Hb_000347_530 Hb_000614_180--Hb_000347_530 Hb_001366_250--Hb_005000_310 Hb_004445_090 Hb_004445_090 Hb_001366_250--Hb_004445_090 Hb_007527_020 Hb_007527_020 Hb_001366_250--Hb_007527_020 Hb_000281_200 Hb_000281_200 Hb_001366_250--Hb_000281_200 Hb_000739_130 Hb_000739_130 Hb_001366_250--Hb_000739_130 Hb_000019_220 Hb_000019_220 Hb_005000_310--Hb_000019_220 Hb_000045_230 Hb_000045_230 Hb_005000_310--Hb_000045_230 Hb_002311_240 Hb_002311_240 Hb_005000_310--Hb_002311_240 Hb_003057_080 Hb_003057_080 Hb_005000_310--Hb_003057_080 Hb_001004_100 Hb_001004_100 Hb_158092_060--Hb_001004_100 Hb_000675_060 Hb_000675_060 Hb_158092_060--Hb_000675_060 Hb_000922_010 Hb_000922_010 Hb_158092_060--Hb_000922_010 Hb_009545_010 Hb_009545_010 Hb_158092_060--Hb_009545_010 Hb_002471_260 Hb_002471_260 Hb_158092_060--Hb_002471_260 Hb_000748_070 Hb_000748_070 Hb_000140_190--Hb_000748_070 Hb_002057_010 Hb_002057_010 Hb_000140_190--Hb_002057_010 Hb_107201_010 Hb_107201_010 Hb_000140_190--Hb_107201_010 Hb_000140_190--Hb_148435_010 Hb_003392_030 Hb_003392_030 Hb_000140_190--Hb_003392_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.195674 0.102337 0.353797 1.40162 0.0421699 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.287685 0.402359 0.23605 8.4643 0.367954

CAGE analysis