Hb_148435_010

Information

Type -
Description -
Location Contig148435: 126-932
Sequence    

Annotation

kegg
ID rcu:RCOM_0731890
description glutathione s-transferase, putative (EC:4.4.1.5)
nr
ID XP_002520474.1
description glutathione s-transferase, putative [Ricinus communis]
swissprot
ID Q9ZW24
description Glutathione S-transferase U7 OS=Arabidopsis thaliana GN=GSTU7 PE=2 SV=1
trembl
ID B9S3A5
description Glutathione s-transferase, putative OS=Ricinus communis GN=RCOM_0731890 PE=3 SV=1
Gene Ontology
ID GO:0005515
description glutathione s-

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_148435_010 0.0 - - glutathione s-transferase, putative [Ricinus communis]
2 Hb_004195_240 0.1073905209 - - Peroxidase 72 precursor, putative [Ricinus communis]
3 Hb_035583_010 0.1206194354 - - PREDICTED: premnaspirodiene oxygenase-like [Jatropha curcas]
4 Hb_000347_550 0.1238898571 transcription factor TF Family: MYB Duplicated homeodomain-like superfamily protein, putative [Theobroma cacao]
5 Hb_061195_010 0.1242390423 - - Galactose oxidase precursor, putative [Ricinus communis]
6 Hb_000748_070 0.1303694856 transcription factor TF Family: WRKY hypothetical protein POPTR_0005s22480g [Populus trichocarpa]
7 Hb_005000_040 0.1303970601 - - ACC oxidase ACCO2 [Manihot esculenta]
8 Hb_000614_180 0.135041849 - - -
9 Hb_004055_180 0.1351085957 - - cell wall invertase [Manihot esculenta]
10 Hb_012239_080 0.1359236454 - - PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 4-like [Jatropha curcas]
11 Hb_012532_020 0.1403257759 - - Isoflavone reductase, putative [Ricinus communis]
12 Hb_097908_010 0.1408535678 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 isoform X2 [Jatropha curcas]
13 Hb_000487_150 0.1423102172 - - PREDICTED: feruloyl CoA ortho-hydroxylase 2-like [Jatropha curcas]
14 Hb_004774_060 0.1428268589 - - -
15 Hb_001936_030 0.1429546159 - - PREDICTED: polygalacturonase At1g48100 isoform X1 [Jatropha curcas]
16 Hb_002248_020 0.144219993 transcription factor TF Family: NAC PREDICTED: transcription factor JUNGBRUNNEN 1-like isoform X1 [Populus euphratica]
17 Hb_173448_010 0.1458378356 - - PREDICTED: galactose oxidase-like [Jatropha curcas]
18 Hb_033363_080 0.1467794936 - - Allene oxide cyclase 3, chloroplast precursor, putative [Ricinus communis]
19 Hb_000059_100 0.1494203108 - - Basic blue protein, putative [Ricinus communis]
20 Hb_000563_610 0.1526099683 - - PREDICTED: putative E3 ubiquitin-protein ligase LIN-1 [Jatropha curcas]

Gene co-expression network

sample Hb_148435_010 Hb_148435_010 Hb_004195_240 Hb_004195_240 Hb_148435_010--Hb_004195_240 Hb_035583_010 Hb_035583_010 Hb_148435_010--Hb_035583_010 Hb_000347_550 Hb_000347_550 Hb_148435_010--Hb_000347_550 Hb_061195_010 Hb_061195_010 Hb_148435_010--Hb_061195_010 Hb_000748_070 Hb_000748_070 Hb_148435_010--Hb_000748_070 Hb_005000_040 Hb_005000_040 Hb_148435_010--Hb_005000_040 Hb_004195_240--Hb_000347_550 Hb_173448_010 Hb_173448_010 Hb_004195_240--Hb_173448_010 Hb_004774_060 Hb_004774_060 Hb_004195_240--Hb_004774_060 Hb_004195_240--Hb_061195_010 Hb_148914_010 Hb_148914_010 Hb_004195_240--Hb_148914_010 Hb_000297_180 Hb_000297_180 Hb_035583_010--Hb_000297_180 Hb_004316_130 Hb_004316_130 Hb_035583_010--Hb_004316_130 Hb_012532_020 Hb_012532_020 Hb_035583_010--Hb_012532_020 Hb_003392_030 Hb_003392_030 Hb_035583_010--Hb_003392_030 Hb_000487_150 Hb_000487_150 Hb_035583_010--Hb_000487_150 Hb_000300_450 Hb_000300_450 Hb_000347_550--Hb_000300_450 Hb_003057_080 Hb_003057_080 Hb_000347_550--Hb_003057_080 Hb_000347_550--Hb_148914_010 Hb_010407_120 Hb_010407_120 Hb_000347_550--Hb_010407_120 Hb_061195_010--Hb_173448_010 Hb_012239_080 Hb_012239_080 Hb_061195_010--Hb_012239_080 Hb_029510_110 Hb_029510_110 Hb_061195_010--Hb_029510_110 Hb_004055_180 Hb_004055_180 Hb_061195_010--Hb_004055_180 Hb_002057_010 Hb_002057_010 Hb_000748_070--Hb_002057_010 Hb_000748_070--Hb_004195_240 Hb_000748_070--Hb_004055_180 Hb_000563_610 Hb_000563_610 Hb_000748_070--Hb_000563_610 Hb_001936_030 Hb_001936_030 Hb_000748_070--Hb_001936_030 Hb_005000_040--Hb_002057_010 Hb_007044_070 Hb_007044_070 Hb_005000_040--Hb_007044_070 Hb_005000_040--Hb_000748_070 Hb_000086_730 Hb_000086_730 Hb_005000_040--Hb_000086_730 Hb_005000_040--Hb_001936_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.260096 3.0384 3.10325 0.0642571 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0790197 0.745467 0 35.9918 1.10807

CAGE analysis