Hb_004195_240

Information

Type -
Description -
Location Contig4195: 193275-195080
Sequence    

Annotation

kegg
ID rcu:RCOM_0533480
description Peroxidase 72 precursor, putative (EC:1.11.1.7)
nr
ID XP_002521512.1
description Peroxidase 72 precursor, putative [Ricinus communis]
swissprot
ID Q9FJZ9
description Peroxidase 72 OS=Arabidopsis thaliana GN=PER72 PE=1 SV=1
trembl
ID B9S693
description Peroxidase OS=Ricinus communis GN=RCOM_0533480 PE=3 SV=1
Gene Ontology
ID GO:0005576
description peroxidase 72-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_41437: 193889-194704
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004195_240 0.0 - - Peroxidase 72 precursor, putative [Ricinus communis]
2 Hb_000347_550 0.0773318153 transcription factor TF Family: MYB Duplicated homeodomain-like superfamily protein, putative [Theobroma cacao]
3 Hb_173448_010 0.1062969148 - - PREDICTED: galactose oxidase-like [Jatropha curcas]
4 Hb_148435_010 0.1073905209 - - glutathione s-transferase, putative [Ricinus communis]
5 Hb_004774_060 0.1166052515 - - -
6 Hb_061195_010 0.1201631292 - - Galactose oxidase precursor, putative [Ricinus communis]
7 Hb_148914_010 0.1248204999 - - glutathione s-transferase, putative [Ricinus communis]
8 Hb_033363_080 0.1260802926 - - Allene oxide cyclase 3, chloroplast precursor, putative [Ricinus communis]
9 Hb_004055_180 0.1271669157 - - cell wall invertase [Manihot esculenta]
10 Hb_000748_070 0.1274060038 transcription factor TF Family: WRKY hypothetical protein POPTR_0005s22480g [Populus trichocarpa]
11 Hb_000300_450 0.1276599996 - - PREDICTED: caffeic acid 3-O-methyltransferase-like isoform X1 [Citrus sinensis]
12 Hb_004222_010 0.1288051846 - - PREDICTED: zinc-metallopeptidase, peroxisomal-like [Jatropha curcas]
13 Hb_175968_010 0.1313607759 - - hypothetical protein JCGZ_21281 [Jatropha curcas]
14 Hb_097908_010 0.1330676861 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 isoform X2 [Jatropha curcas]
15 Hb_012239_080 0.1340885252 - - PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 4-like [Jatropha curcas]
16 Hb_012796_050 0.1342598021 rubber biosynthesis Gene Name: 1-deoxy-D-xylulose-5-phosphate synthase 1-deoxyxylulose-5-phosphate synthase, putative [Ricinus communis]
17 Hb_001279_220 0.140143448 - - protein binding protein, putative [Ricinus communis]
18 Hb_000659_010 0.1422038572 - - PREDICTED: plasma membrane ATPase 2-like isoform X1 [Jatropha curcas]
19 Hb_000563_610 0.1430014879 - - PREDICTED: putative E3 ubiquitin-protein ligase LIN-1 [Jatropha curcas]
20 Hb_000466_090 0.1434891984 - - PREDICTED: E3 ubiquitin-protein ligase RGLG2-like isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_004195_240 Hb_004195_240 Hb_000347_550 Hb_000347_550 Hb_004195_240--Hb_000347_550 Hb_173448_010 Hb_173448_010 Hb_004195_240--Hb_173448_010 Hb_148435_010 Hb_148435_010 Hb_004195_240--Hb_148435_010 Hb_004774_060 Hb_004774_060 Hb_004195_240--Hb_004774_060 Hb_061195_010 Hb_061195_010 Hb_004195_240--Hb_061195_010 Hb_148914_010 Hb_148914_010 Hb_004195_240--Hb_148914_010 Hb_000300_450 Hb_000300_450 Hb_000347_550--Hb_000300_450 Hb_000347_550--Hb_148435_010 Hb_003057_080 Hb_003057_080 Hb_000347_550--Hb_003057_080 Hb_000347_550--Hb_148914_010 Hb_010407_120 Hb_010407_120 Hb_000347_550--Hb_010407_120 Hb_173448_010--Hb_061195_010 Hb_033363_080 Hb_033363_080 Hb_173448_010--Hb_033363_080 Hb_173448_010--Hb_004774_060 Hb_004222_010 Hb_004222_010 Hb_173448_010--Hb_004222_010 Hb_175968_010 Hb_175968_010 Hb_173448_010--Hb_175968_010 Hb_035583_010 Hb_035583_010 Hb_148435_010--Hb_035583_010 Hb_148435_010--Hb_061195_010 Hb_000748_070 Hb_000748_070 Hb_148435_010--Hb_000748_070 Hb_005000_040 Hb_005000_040 Hb_148435_010--Hb_005000_040 Hb_004774_060--Hb_175968_010 Hb_001279_220 Hb_001279_220 Hb_004774_060--Hb_001279_220 Hb_004055_180 Hb_004055_180 Hb_004774_060--Hb_004055_180 Hb_004774_060--Hb_033363_080 Hb_097908_010 Hb_097908_010 Hb_004774_060--Hb_097908_010 Hb_000659_010 Hb_000659_010 Hb_004774_060--Hb_000659_010 Hb_012239_080 Hb_012239_080 Hb_061195_010--Hb_012239_080 Hb_029510_110 Hb_029510_110 Hb_061195_010--Hb_029510_110 Hb_061195_010--Hb_004055_180 Hb_012796_050 Hb_012796_050 Hb_148914_010--Hb_012796_050 Hb_000438_190 Hb_000438_190 Hb_148914_010--Hb_000438_190 Hb_002232_370 Hb_002232_370 Hb_148914_010--Hb_002232_370 Hb_000245_140 Hb_000245_140 Hb_148914_010--Hb_000245_140 Hb_002965_020 Hb_002965_020 Hb_148914_010--Hb_002965_020 Hb_148914_010--Hb_010407_120
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0326964 0.081535 0.0703277 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0321053 0 0.990393 0.066425

CAGE analysis