Hb_173448_010

Information

Type -
Description -
Location Contig173448: 48-359
Sequence    

Annotation

kegg
ID pop:POPTR_0005s25680g
description hypothetical protein
nr
ID XP_012071982.1
description PREDICTED: galactose oxidase-like [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KQU9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04521 PE=4 SV=1
Gene Ontology
ID GO:0045480
description galactose oxidase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_173448_010 0.0 - - PREDICTED: galactose oxidase-like [Jatropha curcas]
2 Hb_061195_010 0.0943914148 - - Galactose oxidase precursor, putative [Ricinus communis]
3 Hb_004195_240 0.1062969148 - - Peroxidase 72 precursor, putative [Ricinus communis]
4 Hb_033363_080 0.1227083077 - - Allene oxide cyclase 3, chloroplast precursor, putative [Ricinus communis]
5 Hb_004774_060 0.1257187016 - - -
6 Hb_004222_010 0.1358375885 - - PREDICTED: zinc-metallopeptidase, peroxisomal-like [Jatropha curcas]
7 Hb_175968_010 0.1366651265 - - hypothetical protein JCGZ_21281 [Jatropha curcas]
8 Hb_000563_610 0.1381775114 - - PREDICTED: putative E3 ubiquitin-protein ligase LIN-1 [Jatropha curcas]
9 Hb_000347_550 0.1398172098 transcription factor TF Family: MYB Duplicated homeodomain-like superfamily protein, putative [Theobroma cacao]
10 Hb_012239_080 0.1410695004 - - PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 4-like [Jatropha curcas]
11 Hb_029510_110 0.1423586701 - - PREDICTED: protein PLANT CADMIUM RESISTANCE 8-like [Jatropha curcas]
12 Hb_000466_090 0.1427905684 - - PREDICTED: E3 ubiquitin-protein ligase RGLG2-like isoform X1 [Jatropha curcas]
13 Hb_001279_220 0.1431369752 - - protein binding protein, putative [Ricinus communis]
14 Hb_004055_180 0.1434546536 - - cell wall invertase [Manihot esculenta]
15 Hb_148914_010 0.143472625 - - glutathione s-transferase, putative [Ricinus communis]
16 Hb_000659_010 0.1439982075 - - PREDICTED: plasma membrane ATPase 2-like isoform X1 [Jatropha curcas]
17 Hb_011145_020 0.1448646935 - - PREDICTED: metalloendoproteinase 1-like [Pyrus x bretschneideri]
18 Hb_097908_010 0.1456162729 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 isoform X2 [Jatropha curcas]
19 Hb_148435_010 0.1458378356 - - glutathione s-transferase, putative [Ricinus communis]
20 Hb_000204_030 0.1467424447 - - PREDICTED: TMV resistance protein N-like [Jatropha curcas]

Gene co-expression network

sample Hb_173448_010 Hb_173448_010 Hb_061195_010 Hb_061195_010 Hb_173448_010--Hb_061195_010 Hb_004195_240 Hb_004195_240 Hb_173448_010--Hb_004195_240 Hb_033363_080 Hb_033363_080 Hb_173448_010--Hb_033363_080 Hb_004774_060 Hb_004774_060 Hb_173448_010--Hb_004774_060 Hb_004222_010 Hb_004222_010 Hb_173448_010--Hb_004222_010 Hb_175968_010 Hb_175968_010 Hb_173448_010--Hb_175968_010 Hb_012239_080 Hb_012239_080 Hb_061195_010--Hb_012239_080 Hb_029510_110 Hb_029510_110 Hb_061195_010--Hb_029510_110 Hb_004055_180 Hb_004055_180 Hb_061195_010--Hb_004055_180 Hb_061195_010--Hb_004195_240 Hb_148435_010 Hb_148435_010 Hb_061195_010--Hb_148435_010 Hb_000347_550 Hb_000347_550 Hb_004195_240--Hb_000347_550 Hb_004195_240--Hb_148435_010 Hb_004195_240--Hb_004774_060 Hb_148914_010 Hb_148914_010 Hb_004195_240--Hb_148914_010 Hb_033363_080--Hb_004774_060 Hb_011145_020 Hb_011145_020 Hb_033363_080--Hb_011145_020 Hb_033363_080--Hb_175968_010 Hb_000438_190 Hb_000438_190 Hb_033363_080--Hb_000438_190 Hb_012796_050 Hb_012796_050 Hb_033363_080--Hb_012796_050 Hb_033363_080--Hb_004055_180 Hb_004774_060--Hb_175968_010 Hb_001279_220 Hb_001279_220 Hb_004774_060--Hb_001279_220 Hb_004774_060--Hb_004055_180 Hb_097908_010 Hb_097908_010 Hb_004774_060--Hb_097908_010 Hb_000659_010 Hb_000659_010 Hb_004774_060--Hb_000659_010 Hb_004222_010--Hb_000659_010 Hb_004222_010--Hb_175968_010 Hb_022815_020 Hb_022815_020 Hb_004222_010--Hb_022815_020 Hb_001003_020 Hb_001003_020 Hb_004222_010--Hb_001003_020 Hb_004222_010--Hb_004055_180 Hb_004222_010--Hb_097908_010 Hb_175968_010--Hb_001279_220 Hb_175968_010--Hb_000659_010 Hb_175968_010--Hb_097908_010 Hb_175968_010--Hb_004055_180
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.427787 0.64368 1.76027 1.78998 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.2674 0 20.3291 1.68828

CAGE analysis