Hb_002849_150

Information

Type -
Description -
Location Contig2849: 142564-145981
Sequence    

Annotation

kegg
ID pop:POPTR_0014s08350g
description POPTRDRAFT_664003; hypothetical protein
nr
ID KDP28596.1
description hypothetical protein JCGZ_14367 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JXA2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14367 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_29838: 142887-145773
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002849_150 0.0 - - hypothetical protein JCGZ_14367 [Jatropha curcas]
2 Hb_001004_100 0.1725091079 - - ATP binding protein, putative [Ricinus communis]
3 Hb_107201_010 0.2086591261 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_26658 [Jatropha curcas]
4 Hb_000135_050 0.2169695209 - - PREDICTED: putative leucine-rich repeat receptor-like protein kinase At2g19210-like isoform X2 [Citrus sinensis]
5 Hb_000922_010 0.2177143768 - - hypothetical protein JCGZ_11488 [Jatropha curcas]
6 Hb_012753_190 0.2178182832 - - PREDICTED: protein HAPLESS 2 [Populus euphratica]
7 Hb_029510_110 0.2252967323 - - PREDICTED: protein PLANT CADMIUM RESISTANCE 8-like [Jatropha curcas]
8 Hb_008768_010 0.2259965789 - - PREDICTED: equilibrative nucleotide transporter 8 isoform X1 [Jatropha curcas]
9 Hb_000748_070 0.2267008 transcription factor TF Family: WRKY hypothetical protein POPTR_0005s22480g [Populus trichocarpa]
10 Hb_041184_010 0.2323133758 desease resistance Gene Name: NB-ARC Disease resistance protein RPS5, putative [Ricinus communis]
11 Hb_012553_020 0.2326414965 - - hypothetical protein JCGZ_09282 [Jatropha curcas]
12 Hb_050203_010 0.2340801574 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein RGA3 [Jatropha curcas]
13 Hb_002046_100 0.2372857604 transcription factor TF Family: MYB PREDICTED: transcription factor MYB82 [Jatropha curcas]
14 Hb_000140_190 0.2375148818 - - acc synthase, putative [Ricinus communis]
15 Hb_000471_080 0.2380599917 - - PREDICTED: probable mitochondrial chaperone BCS1-A [Jatropha curcas]
16 Hb_008097_020 0.2381088872 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850 [Jatropha curcas]
17 Hb_004855_050 0.2389478831 - - hypothetical protein POPTR_0016s12140g [Populus trichocarpa]
18 Hb_001123_010 0.2389740712 - - conserved hypothetical protein [Ricinus communis]
19 Hb_009545_010 0.239465452 transcription factor TF Family: GNAT Acetyltransferase [Medicago truncatula]
20 Hb_000739_130 0.2405008926 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_002849_150 Hb_002849_150 Hb_001004_100 Hb_001004_100 Hb_002849_150--Hb_001004_100 Hb_107201_010 Hb_107201_010 Hb_002849_150--Hb_107201_010 Hb_000135_050 Hb_000135_050 Hb_002849_150--Hb_000135_050 Hb_000922_010 Hb_000922_010 Hb_002849_150--Hb_000922_010 Hb_012753_190 Hb_012753_190 Hb_002849_150--Hb_012753_190 Hb_029510_110 Hb_029510_110 Hb_002849_150--Hb_029510_110 Hb_001123_010 Hb_001123_010 Hb_001004_100--Hb_001123_010 Hb_001004_100--Hb_012753_190 Hb_158092_060 Hb_158092_060 Hb_001004_100--Hb_158092_060 Hb_029904_010 Hb_029904_010 Hb_001004_100--Hb_029904_010 Hb_000653_010 Hb_000653_010 Hb_001004_100--Hb_000653_010 Hb_000140_190 Hb_000140_190 Hb_107201_010--Hb_000140_190 Hb_107201_010--Hb_029510_110 Hb_107201_010--Hb_001004_100 Hb_061195_010 Hb_061195_010 Hb_107201_010--Hb_061195_010 Hb_012239_080 Hb_012239_080 Hb_107201_010--Hb_012239_080 Hb_000471_080 Hb_000471_080 Hb_107201_010--Hb_000471_080 Hb_000281_200 Hb_000281_200 Hb_000135_050--Hb_000281_200 Hb_000648_120 Hb_000648_120 Hb_000135_050--Hb_000648_120 Hb_000189_260 Hb_000189_260 Hb_000135_050--Hb_000189_260 Hb_159769_010 Hb_159769_010 Hb_000135_050--Hb_159769_010 Hb_011486_030 Hb_011486_030 Hb_000135_050--Hb_011486_030 Hb_020332_040 Hb_020332_040 Hb_000135_050--Hb_020332_040 Hb_005152_010 Hb_005152_010 Hb_000922_010--Hb_005152_010 Hb_000922_010--Hb_001004_100 Hb_000922_010--Hb_158092_060 Hb_000922_010--Hb_000471_080 Hb_000922_010--Hb_001123_010 Hb_030982_060 Hb_030982_060 Hb_000922_010--Hb_030982_060 Hb_012753_190--Hb_000653_010 Hb_006141_030 Hb_006141_030 Hb_012753_190--Hb_006141_030 Hb_007101_210 Hb_007101_210 Hb_012753_190--Hb_007101_210 Hb_000230_230 Hb_000230_230 Hb_012753_190--Hb_000230_230 Hb_001268_330 Hb_001268_330 Hb_012753_190--Hb_001268_330 Hb_001104_200 Hb_001104_200 Hb_029510_110--Hb_001104_200 Hb_029510_110--Hb_061195_010 Hb_000204_030 Hb_000204_030 Hb_029510_110--Hb_000204_030 Hb_000563_610 Hb_000563_610 Hb_029510_110--Hb_000563_610 Hb_001366_250 Hb_001366_250 Hb_029510_110--Hb_001366_250 Hb_029510_110--Hb_012239_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0374544 1.10552 0.991845 2.20535 0 0.0172779
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.342589 0.209608 3.5745 22.877 2.17525

CAGE analysis