Hb_159769_010

Information

Type -
Description -
Location Contig159769: 1299-1802
Sequence    

Annotation

kegg
ID pop:POPTR_0001s04040g
description POPTRDRAFT_750424; hypothetical protein
nr
ID XP_012080815.1
description PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO1 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KFK1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16184 PE=4 SV=1
Gene Ontology
ID GO:0016491
description lrr receptor-like serine threonine-protein kinase gso1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_159769_010 0.0 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO1 [Jatropha curcas]
2 Hb_039655_010 0.1102106016 - - PREDICTED: BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1-like [Malus domestica]
3 Hb_000281_200 0.1108604533 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO2 [Jatropha curcas]
4 Hb_000135_050 0.1195034609 - - PREDICTED: putative leucine-rich repeat receptor-like protein kinase At2g19210-like isoform X2 [Citrus sinensis]
5 Hb_022250_050 0.125547345 - - conserved hypothetical protein [Ricinus communis]
6 Hb_005356_010 0.1268043275 - - hypothetical protein POPTR_0003s16550g [Populus trichocarpa]
7 Hb_007527_020 0.127279144 - - PREDICTED: feruloyl CoA ortho-hydroxylase 1 [Jatropha curcas]
8 Hb_004204_160 0.1318181089 - - S-locus-specific glycoprotein S6 precursor, putative [Ricinus communis]
9 Hb_000739_130 0.1334672624 - - conserved hypothetical protein [Ricinus communis]
10 Hb_000648_120 0.1335275257 - - PREDICTED: L-type lectin-domain containing receptor kinase IV.1 [Vitis vinifera]
11 Hb_001288_010 0.139434966 - - -
12 Hb_001699_240 0.1396032396 - - PREDICTED: naringenin,2-oxoglutarate 3-dioxygenase [Jatropha curcas]
13 Hb_027402_120 0.1398577371 - - zinc finger protein, putative [Ricinus communis]
14 Hb_002805_230 0.1413340437 - - PREDICTED: protein TRANSPARENT TESTA 12 isoform X1 [Jatropha curcas]
15 Hb_003090_070 0.1423071689 - - PREDICTED: laccase-7 [Jatropha curcas]
16 Hb_002534_080 0.1428606719 - - zinc finger protein, putative [Ricinus communis]
17 Hb_178389_020 0.1436209102 - - PREDICTED: cytochrome P450 86B1-like [Jatropha curcas]
18 Hb_002818_080 0.1439321048 transcription factor TF Family: AUX/IAA Auxin-responsive protein IAA20, putative [Ricinus communis]
19 Hb_058620_010 0.1466694959 - - cytochrome P450, putative [Ricinus communis]
20 Hb_007532_050 0.1478384265 - - 9-cis-epoxycarotenoid dioxygenase, putative [Ricinus communis]

Gene co-expression network

sample Hb_159769_010 Hb_159769_010 Hb_039655_010 Hb_039655_010 Hb_159769_010--Hb_039655_010 Hb_000281_200 Hb_000281_200 Hb_159769_010--Hb_000281_200 Hb_000135_050 Hb_000135_050 Hb_159769_010--Hb_000135_050 Hb_022250_050 Hb_022250_050 Hb_159769_010--Hb_022250_050 Hb_005356_010 Hb_005356_010 Hb_159769_010--Hb_005356_010 Hb_007527_020 Hb_007527_020 Hb_159769_010--Hb_007527_020 Hb_004204_160 Hb_004204_160 Hb_039655_010--Hb_004204_160 Hb_039655_010--Hb_005356_010 Hb_039655_010--Hb_000281_200 Hb_178389_020 Hb_178389_020 Hb_039655_010--Hb_178389_020 Hb_004564_010 Hb_004564_010 Hb_039655_010--Hb_004564_010 Hb_001134_040 Hb_001134_040 Hb_039655_010--Hb_001134_040 Hb_001288_010 Hb_001288_010 Hb_000281_200--Hb_001288_010 Hb_000281_200--Hb_005356_010 Hb_000281_200--Hb_007527_020 Hb_003968_020 Hb_003968_020 Hb_000281_200--Hb_003968_020 Hb_000281_200--Hb_178389_020 Hb_000135_050--Hb_000281_200 Hb_000648_120 Hb_000648_120 Hb_000135_050--Hb_000648_120 Hb_000189_260 Hb_000189_260 Hb_000135_050--Hb_000189_260 Hb_011486_030 Hb_011486_030 Hb_000135_050--Hb_011486_030 Hb_020332_040 Hb_020332_040 Hb_000135_050--Hb_020332_040 Hb_002553_170 Hb_002553_170 Hb_022250_050--Hb_002553_170 Hb_001040_190 Hb_001040_190 Hb_022250_050--Hb_001040_190 Hb_001930_060 Hb_001930_060 Hb_022250_050--Hb_001930_060 Hb_002835_020 Hb_002835_020 Hb_022250_050--Hb_002835_020 Hb_001301_020 Hb_001301_020 Hb_022250_050--Hb_001301_020 Hb_001140_330 Hb_001140_330 Hb_022250_050--Hb_001140_330 Hb_005356_010--Hb_007527_020 Hb_000301_030 Hb_000301_030 Hb_005356_010--Hb_000301_030 Hb_005356_010--Hb_178389_020 Hb_001544_040 Hb_001544_040 Hb_005356_010--Hb_001544_040 Hb_005356_010--Hb_001288_010 Hb_002805_230 Hb_002805_230 Hb_007527_020--Hb_002805_230 Hb_007532_050 Hb_007532_050 Hb_007527_020--Hb_007532_050 Hb_000513_110 Hb_000513_110 Hb_007527_020--Hb_000513_110 Hb_007527_020--Hb_001544_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.217389 1.69257 0.502509 1.63171 0 0.358103
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.264945 0.104074 0.529796 35.1052 0.194905

CAGE analysis