Hb_001040_190

Information

Type transcription factor
Description TF Family: HSF
Location Contig1040: 231586-233395
Sequence    

Annotation

kegg
ID pop:POPTR_0004s04260g
description POPTRDRAFT_758907; hypothetical protein
nr
ID XP_012091595.1
description PREDICTED: heat stress transcription factor B-2a-like [Jatropha curcas]
swissprot
ID Q9SCW4
description Heat stress transcription factor B-2a OS=Arabidopsis thaliana GN=HSFB2A PE=2 SV=1
trembl
ID A0A067JB20
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21433 PE=3 SV=1
Gene Ontology
ID GO:0005634
description heat stress transcription factor b-2a-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_01479: 231572-233427
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001040_190 0.0 transcription factor TF Family: HSF PREDICTED: heat stress transcription factor B-2a-like [Jatropha curcas]
2 Hb_058620_040 0.0676807524 - - Myrcene synthase, chloroplastic, putative isoform 1 [Theobroma cacao]
3 Hb_002553_170 0.0692331535 - - PREDICTED: early nodulin-75-like [Jatropha curcas]
4 Hb_003334_080 0.0696156712 - - Reticuline oxidase precursor, putative [Ricinus communis]
5 Hb_058620_050 0.0717581152 - - PREDICTED: terpene synthase 10-like [Jatropha curcas]
6 Hb_000141_070 0.0718794448 - - l-lactate dehydrogenase, putative [Ricinus communis]
7 Hb_004693_010 0.0731783839 - - hypothetical protein JCGZ_02321 [Jatropha curcas]
8 Hb_002835_020 0.0744572334 - - PREDICTED: cytochrome P450 71A1-like [Jatropha curcas]
9 Hb_000329_160 0.0746359893 - - PREDICTED: pectinesterase 2 isoform X1 [Jatropha curcas]
10 Hb_004057_050 0.0747170646 - - PREDICTED: cytochrome P450 76A1-like [Jatropha curcas]
11 Hb_005120_010 0.0773685693 - - amino acid transporter, putative [Ricinus communis]
12 Hb_001930_060 0.0787718545 - - PREDICTED: cytochrome P450 71D9-like [Fragaria vesca subsp. vesca]
13 Hb_022250_050 0.0792471481 - - conserved hypothetical protein [Ricinus communis]
14 Hb_000086_710 0.0799709164 - - PREDICTED: feruloyl CoA ortho-hydroxylase 2-like [Jatropha curcas]
15 Hb_000563_060 0.081831014 - - PREDICTED: uncharacterized protein LOC100306381 isoform X1 [Glycine max]
16 Hb_039363_010 0.0831848795 - - PREDICTED: cytochrome P450 CYP82D47-like [Jatropha curcas]
17 Hb_000388_160 0.0833823058 - - xyloglucan endo-1 family protein [Populus trichocarpa]
18 Hb_001140_330 0.0839558554 - - PREDICTED: uncharacterized protein LOC105142675 [Populus euphratica]
19 Hb_019392_010 0.0845803416 - - PREDICTED: LOW QUALITY PROTEIN: probable S-adenosylmethionine-dependent methyltransferase At5g38100 [Jatropha curcas]
20 Hb_006925_010 0.0858872572 - - PREDICTED: uncharacterized protein LOC101777526 [Setaria italica]

Gene co-expression network

sample Hb_001040_190 Hb_001040_190 Hb_058620_040 Hb_058620_040 Hb_001040_190--Hb_058620_040 Hb_002553_170 Hb_002553_170 Hb_001040_190--Hb_002553_170 Hb_003334_080 Hb_003334_080 Hb_001040_190--Hb_003334_080 Hb_058620_050 Hb_058620_050 Hb_001040_190--Hb_058620_050 Hb_000141_070 Hb_000141_070 Hb_001040_190--Hb_000141_070 Hb_004693_010 Hb_004693_010 Hb_001040_190--Hb_004693_010 Hb_058620_040--Hb_058620_050 Hb_058620_040--Hb_003334_080 Hb_058620_040--Hb_000141_070 Hb_058620_040--Hb_004693_010 Hb_006925_010 Hb_006925_010 Hb_058620_040--Hb_006925_010 Hb_000086_710 Hb_000086_710 Hb_058620_040--Hb_000086_710 Hb_001930_060 Hb_001930_060 Hb_002553_170--Hb_001930_060 Hb_002835_020 Hb_002835_020 Hb_002553_170--Hb_002835_020 Hb_002553_170--Hb_003334_080 Hb_000563_060 Hb_000563_060 Hb_002553_170--Hb_000563_060 Hb_003188_020 Hb_003188_020 Hb_002553_170--Hb_003188_020 Hb_002553_170--Hb_000141_070 Hb_003334_080--Hb_000141_070 Hb_009568_010 Hb_009568_010 Hb_003334_080--Hb_009568_010 Hb_003334_080--Hb_002835_020 Hb_003334_080--Hb_058620_050 Hb_058620_050--Hb_000141_070 Hb_058620_050--Hb_004693_010 Hb_058620_050--Hb_009568_010 Hb_007483_040 Hb_007483_040 Hb_058620_050--Hb_007483_040 Hb_000141_070--Hb_009568_010 Hb_000141_070--Hb_007483_040 Hb_001456_040 Hb_001456_040 Hb_000141_070--Hb_001456_040 Hb_000712_070 Hb_000712_070 Hb_004693_010--Hb_000712_070 Hb_004693_010--Hb_000141_070 Hb_004693_010--Hb_003334_080 Hb_000318_440 Hb_000318_440 Hb_004693_010--Hb_000318_440
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.18628 0.312913 0.501507 0.0273778 0.12219
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.0955458 30.6224 0.106033

CAGE analysis