Hb_003968_020

Information

Type -
Description -
Location Contig3968: 33341-34804
Sequence    

Annotation

kegg
ID gmx:100804361
description limonoid UDP-glucosyltransferase-like
nr
ID XP_003555960.1
description PREDICTED: limonoid UDP-glucosyltransferase-like [Glycine max]
swissprot
ID Q9FI99
description UDP-glycosyltransferase 76C1 OS=Arabidopsis thaliana GN=UGT76C1 PE=1 SV=1
trembl
ID I1NFW9
description Uncharacterized protein OS=Glycine max PE=3 SV=1
Gene Ontology
ID GO:0047913
description limonoid udp-glucosyltransferase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003968_020 0.0 - - PREDICTED: limonoid UDP-glucosyltransferase-like [Glycine max]
2 Hb_000076_200 0.0681910729 - - conserved hypothetical protein [Ricinus communis]
3 Hb_023080_010 0.0709243824 - - PREDICTED: probable serine incorporator [Jatropha curcas]
4 Hb_006620_040 0.0766630459 - - PREDICTED: probable 6-phosphogluconolactonase 1 [Jatropha curcas]
5 Hb_039562_010 0.0773305373 - - PREDICTED: protein SRG1-like [Jatropha curcas]
6 Hb_000281_200 0.0832334427 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO2 [Jatropha curcas]
7 Hb_001288_010 0.083483991 - - -
8 Hb_000907_190 0.0929796077 - - PREDICTED: uncharacterized protein At4g15970-like [Jatropha curcas]
9 Hb_005356_010 0.0974020966 - - hypothetical protein POPTR_0003s16550g [Populus trichocarpa]
10 Hb_178389_020 0.0974973349 - - PREDICTED: cytochrome P450 86B1-like [Jatropha curcas]
11 Hb_002805_230 0.0996845888 - - PREDICTED: protein TRANSPARENT TESTA 12 isoform X1 [Jatropha curcas]
12 Hb_058620_010 0.1002194612 - - cytochrome P450, putative [Ricinus communis]
13 Hb_001134_040 0.1009640099 - - PREDICTED: EG45-like domain containing protein [Jatropha curcas]
14 Hb_000318_440 0.1039832402 - - PREDICTED: allene oxide synthase 2-like [Jatropha curcas]
15 Hb_012660_010 0.1041997352 - - hypothetical protein JCGZ_25971 [Jatropha curcas]
16 Hb_007532_050 0.104649384 - - 9-cis-epoxycarotenoid dioxygenase, putative [Ricinus communis]
17 Hb_011486_030 0.1057011134 - - branched-chain amino acid aminotransferase, putative [Ricinus communis]
18 Hb_007527_020 0.1074180177 - - PREDICTED: feruloyl CoA ortho-hydroxylase 1 [Jatropha curcas]
19 Hb_004037_010 0.1085265078 - - PREDICTED: uncharacterized protein LOC105632369 [Jatropha curcas]
20 Hb_023732_020 0.1137896284 - - PREDICTED: fatty acyl-CoA reductase 3-like [Jatropha curcas]

Gene co-expression network

sample Hb_003968_020 Hb_003968_020 Hb_000076_200 Hb_000076_200 Hb_003968_020--Hb_000076_200 Hb_023080_010 Hb_023080_010 Hb_003968_020--Hb_023080_010 Hb_006620_040 Hb_006620_040 Hb_003968_020--Hb_006620_040 Hb_039562_010 Hb_039562_010 Hb_003968_020--Hb_039562_010 Hb_000281_200 Hb_000281_200 Hb_003968_020--Hb_000281_200 Hb_001288_010 Hb_001288_010 Hb_003968_020--Hb_001288_010 Hb_007532_050 Hb_007532_050 Hb_000076_200--Hb_007532_050 Hb_004037_010 Hb_004037_010 Hb_000076_200--Hb_004037_010 Hb_005356_010 Hb_005356_010 Hb_000076_200--Hb_005356_010 Hb_000161_250 Hb_000161_250 Hb_000076_200--Hb_000161_250 Hb_007527_020 Hb_007527_020 Hb_000076_200--Hb_007527_020 Hb_023732_020 Hb_023732_020 Hb_023080_010--Hb_023732_020 Hb_003073_020 Hb_003073_020 Hb_023080_010--Hb_003073_020 Hb_032717_030 Hb_032717_030 Hb_023080_010--Hb_032717_030 Hb_023080_010--Hb_039562_010 Hb_023080_010--Hb_006620_040 Hb_006620_040--Hb_039562_010 Hb_000466_090 Hb_000466_090 Hb_006620_040--Hb_000466_090 Hb_003189_030 Hb_003189_030 Hb_006620_040--Hb_003189_030 Hb_000907_190 Hb_000907_190 Hb_006620_040--Hb_000907_190 Hb_000318_440 Hb_000318_440 Hb_039562_010--Hb_000318_440 Hb_004693_010 Hb_004693_010 Hb_039562_010--Hb_004693_010 Hb_135392_010 Hb_135392_010 Hb_039562_010--Hb_135392_010 Hb_004097_080 Hb_004097_080 Hb_039562_010--Hb_004097_080 Hb_002173_080 Hb_002173_080 Hb_039562_010--Hb_002173_080 Hb_000281_200--Hb_001288_010 Hb_000281_200--Hb_005356_010 Hb_000281_200--Hb_007527_020 Hb_178389_020 Hb_178389_020 Hb_000281_200--Hb_178389_020 Hb_039655_010 Hb_039655_010 Hb_000281_200--Hb_039655_010 Hb_012660_010 Hb_012660_010 Hb_001288_010--Hb_012660_010 Hb_004564_010 Hb_004564_010 Hb_001288_010--Hb_004564_010 Hb_001288_010--Hb_178389_020 Hb_001442_080 Hb_001442_080 Hb_001288_010--Hb_001442_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 4.43114 0.692864 5.50264 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0963492 0.050533 0 109.595 3.74911

CAGE analysis