Hb_006620_040

Information

Type -
Description -
Location Contig6620: 45455-49132
Sequence    

Annotation

kegg
ID tcc:TCM_035024
description 6-phosphogluconolactonase
nr
ID XP_012078354.1
description PREDICTED: probable 6-phosphogluconolactonase 1 [Jatropha curcas]
swissprot
ID Q6Z4H0
description Probable 6-phosphogluconolactonase 2 OS=Oryza sativa subsp. japonica GN=Os07g0604000 PE=2 SV=1
trembl
ID A0A067K9I7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12039 PE=4 SV=1
Gene Ontology
ID GO:0016787
description probable 6-phosphogluconolactonase 2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_53078: 45619-49120
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006620_040 0.0 - - PREDICTED: probable 6-phosphogluconolactonase 1 [Jatropha curcas]
2 Hb_003968_020 0.0766630459 - - PREDICTED: limonoid UDP-glucosyltransferase-like [Glycine max]
3 Hb_039562_010 0.0879798827 - - PREDICTED: protein SRG1-like [Jatropha curcas]
4 Hb_000466_090 0.0967615292 - - PREDICTED: E3 ubiquitin-protein ligase RGLG2-like isoform X1 [Jatropha curcas]
5 Hb_023080_010 0.0985918256 - - PREDICTED: probable serine incorporator [Jatropha curcas]
6 Hb_003189_030 0.0998811875 - - hypothetical protein Csa_4G304750 [Cucumis sativus]
7 Hb_000907_190 0.1013307197 - - PREDICTED: uncharacterized protein At4g15970-like [Jatropha curcas]
8 Hb_023732_020 0.1133721283 - - PREDICTED: fatty acyl-CoA reductase 3-like [Jatropha curcas]
9 Hb_000076_200 0.1137370761 - - conserved hypothetical protein [Ricinus communis]
10 Hb_000318_440 0.1198439474 - - PREDICTED: allene oxide synthase 2-like [Jatropha curcas]
11 Hb_002173_080 0.1213744806 - - alcohol dehydrogenase, putative [Ricinus communis]
12 Hb_000300_450 0.1280752 - - PREDICTED: caffeic acid 3-O-methyltransferase-like isoform X1 [Citrus sinensis]
13 Hb_135392_010 0.1300838506 - - PREDICTED: flavonol synthase/flavanone 3-hydroxylase-like [Jatropha curcas]
14 Hb_000281_200 0.1336560576 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO2 [Jatropha curcas]
15 Hb_058620_010 0.1345230772 - - cytochrome P450, putative [Ricinus communis]
16 Hb_002805_230 0.1382779229 - - PREDICTED: protein TRANSPARENT TESTA 12 isoform X1 [Jatropha curcas]
17 Hb_001134_040 0.1385285089 - - PREDICTED: EG45-like domain containing protein [Jatropha curcas]
18 Hb_001250_140 0.1387109867 - - PREDICTED: cysteine-rich receptor-like protein kinase 2 [Jatropha curcas]
19 Hb_000347_550 0.139153807 transcription factor TF Family: MYB Duplicated homeodomain-like superfamily protein, putative [Theobroma cacao]
20 Hb_004097_080 0.140360811 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g36180 isoform X1 [Nicotiana tomentosiformis]

Gene co-expression network

sample Hb_006620_040 Hb_006620_040 Hb_003968_020 Hb_003968_020 Hb_006620_040--Hb_003968_020 Hb_039562_010 Hb_039562_010 Hb_006620_040--Hb_039562_010 Hb_000466_090 Hb_000466_090 Hb_006620_040--Hb_000466_090 Hb_023080_010 Hb_023080_010 Hb_006620_040--Hb_023080_010 Hb_003189_030 Hb_003189_030 Hb_006620_040--Hb_003189_030 Hb_000907_190 Hb_000907_190 Hb_006620_040--Hb_000907_190 Hb_000076_200 Hb_000076_200 Hb_003968_020--Hb_000076_200 Hb_003968_020--Hb_023080_010 Hb_003968_020--Hb_039562_010 Hb_000281_200 Hb_000281_200 Hb_003968_020--Hb_000281_200 Hb_001288_010 Hb_001288_010 Hb_003968_020--Hb_001288_010 Hb_000318_440 Hb_000318_440 Hb_039562_010--Hb_000318_440 Hb_004693_010 Hb_004693_010 Hb_039562_010--Hb_004693_010 Hb_135392_010 Hb_135392_010 Hb_039562_010--Hb_135392_010 Hb_004097_080 Hb_004097_080 Hb_039562_010--Hb_004097_080 Hb_002173_080 Hb_002173_080 Hb_039562_010--Hb_002173_080 Hb_000466_090--Hb_003189_030 Hb_000466_090--Hb_002173_080 Hb_000659_010 Hb_000659_010 Hb_000466_090--Hb_000659_010 Hb_000487_150 Hb_000487_150 Hb_000466_090--Hb_000487_150 Hb_001003_020 Hb_001003_020 Hb_000466_090--Hb_001003_020 Hb_023732_020 Hb_023732_020 Hb_023080_010--Hb_023732_020 Hb_003073_020 Hb_003073_020 Hb_023080_010--Hb_003073_020 Hb_032717_030 Hb_032717_030 Hb_023080_010--Hb_032717_030 Hb_023080_010--Hb_039562_010 Hb_035726_020 Hb_035726_020 Hb_003189_030--Hb_035726_020 Hb_003189_030--Hb_001003_020 Hb_003189_030--Hb_002173_080 Hb_003189_030--Hb_000659_010 Hb_000907_190--Hb_003968_020 Hb_000907_190--Hb_023080_010 Hb_004190_010 Hb_004190_010 Hb_000907_190--Hb_004190_010 Hb_000907_190--Hb_000076_200 Hb_012660_010 Hb_012660_010 Hb_000907_190--Hb_012660_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.152197 0.0303383 0.280511 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0364956 0 6.16869 0.375131

CAGE analysis