Hb_023732_020

Information

Type -
Description -
Location Contig23732: 35040-37786
Sequence    

Annotation

kegg
ID rcu:RCOM_0791890
description Male sterility protein, putative
nr
ID XP_012066824.1
description PREDICTED: fatty acyl-CoA reductase 3-like [Jatropha curcas]
swissprot
ID Q9XGY7
description Alcohol-forming fatty acyl-CoA reductase OS=Simmondsia chinensis PE=1 SV=1
trembl
ID A0A067LE52
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01940 PE=4 SV=1
Gene Ontology
ID GO:0080019
description male sterility

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_24811: 35700-36134
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_023732_020 0.0 - - PREDICTED: fatty acyl-CoA reductase 3-like [Jatropha curcas]
2 Hb_003073_020 0.0574263077 - - protein binding protein, putative [Ricinus communis]
3 Hb_023080_010 0.0635296819 - - PREDICTED: probable serine incorporator [Jatropha curcas]
4 Hb_000712_060 0.071625554 - - PREDICTED: uncharacterized protein LOC105631517 [Jatropha curcas]
5 Hb_000828_020 0.0845765155 - - PREDICTED: secoisolariciresinol dehydrogenase-like [Jatropha curcas]
6 Hb_032717_030 0.0889837701 - - PREDICTED: CASP-like protein 1B2 [Jatropha curcas]
7 Hb_039562_010 0.09010305 - - PREDICTED: protein SRG1-like [Jatropha curcas]
8 Hb_000120_700 0.0937326046 - - PREDICTED: cytochrome P450 CYP82D47-like [Jatropha curcas]
9 Hb_000221_200 0.0946947004 - - hypothetical protein JCGZ_15819 [Jatropha curcas]
10 Hb_022115_030 0.0954195937 - - PREDICTED: umecyanin-like [Jatropha curcas]
11 Hb_002249_180 0.1017423494 transcription factor TF Family: ERF DNA binding protein, putative [Ricinus communis]
12 Hb_004097_080 0.1029896071 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g36180 isoform X1 [Nicotiana tomentosiformis]
13 Hb_001948_040 0.1033925627 rubber biosynthesis Gene Name: Geranyl geranyl diphosphate synthase geranyl geranyl pyrophosphate synthase, putative [Ricinus communis]
14 Hb_039363_010 0.1081254574 - - PREDICTED: cytochrome P450 CYP82D47-like [Jatropha curcas]
15 Hb_135392_010 0.1120814382 - - PREDICTED: flavonol synthase/flavanone 3-hydroxylase-like [Jatropha curcas]
16 Hb_006620_040 0.1133721283 - - PREDICTED: probable 6-phosphogluconolactonase 1 [Jatropha curcas]
17 Hb_003968_020 0.1137896284 - - PREDICTED: limonoid UDP-glucosyltransferase-like [Glycine max]
18 Hb_002835_020 0.1145070772 - - PREDICTED: cytochrome P450 71A1-like [Jatropha curcas]
19 Hb_058620_010 0.1148314358 - - cytochrome P450, putative [Ricinus communis]
20 Hb_005433_050 0.1174312463 - - PREDICTED: uncharacterized protein At1g66480-like [Populus euphratica]

Gene co-expression network

sample Hb_023732_020 Hb_023732_020 Hb_003073_020 Hb_003073_020 Hb_023732_020--Hb_003073_020 Hb_023080_010 Hb_023080_010 Hb_023732_020--Hb_023080_010 Hb_000712_060 Hb_000712_060 Hb_023732_020--Hb_000712_060 Hb_000828_020 Hb_000828_020 Hb_023732_020--Hb_000828_020 Hb_032717_030 Hb_032717_030 Hb_023732_020--Hb_032717_030 Hb_039562_010 Hb_039562_010 Hb_023732_020--Hb_039562_010 Hb_003073_020--Hb_032717_030 Hb_039363_010 Hb_039363_010 Hb_003073_020--Hb_039363_010 Hb_003073_020--Hb_000828_020 Hb_002835_020 Hb_002835_020 Hb_003073_020--Hb_002835_020 Hb_005433_050 Hb_005433_050 Hb_003073_020--Hb_005433_050 Hb_003968_020 Hb_003968_020 Hb_023080_010--Hb_003968_020 Hb_023080_010--Hb_003073_020 Hb_023080_010--Hb_032717_030 Hb_023080_010--Hb_039562_010 Hb_006620_040 Hb_006620_040 Hb_023080_010--Hb_006620_040 Hb_000712_060--Hb_000828_020 Hb_001948_040 Hb_001948_040 Hb_000712_060--Hb_001948_040 Hb_009026_040 Hb_009026_040 Hb_000712_060--Hb_009026_040 Hb_000221_200 Hb_000221_200 Hb_000712_060--Hb_000221_200 Hb_000712_060--Hb_003073_020 Hb_000828_020--Hb_000221_200 Hb_000828_020--Hb_001948_040 Hb_000828_020--Hb_009026_040 Hb_002249_180 Hb_002249_180 Hb_000828_020--Hb_002249_180 Hb_032717_030--Hb_005433_050 Hb_022115_030 Hb_022115_030 Hb_032717_030--Hb_022115_030 Hb_020141_020 Hb_020141_020 Hb_032717_030--Hb_020141_020 Hb_100786_010 Hb_100786_010 Hb_032717_030--Hb_100786_010 Hb_000828_030 Hb_000828_030 Hb_032717_030--Hb_000828_030 Hb_000318_440 Hb_000318_440 Hb_039562_010--Hb_000318_440 Hb_039562_010--Hb_003968_020 Hb_004693_010 Hb_004693_010 Hb_039562_010--Hb_004693_010 Hb_135392_010 Hb_135392_010 Hb_039562_010--Hb_135392_010 Hb_004097_080 Hb_004097_080 Hb_039562_010--Hb_004097_080 Hb_002173_080 Hb_002173_080 Hb_039562_010--Hb_002173_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0314862 0 0.024598 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 1.75587 0.0589364

CAGE analysis