Hb_032717_030

Information

Type -
Description -
Location Contig32717: 87012-89509
Sequence    

Annotation

kegg
ID rcu:RCOM_0770240
description hypothetical protein
nr
ID XP_012075548.1
description PREDICTED: CASP-like protein 1B2 [Jatropha curcas]
swissprot
ID B9SV63
description CASP-like protein 1B1 OS=Ricinus communis GN=RCOM_0770240 PE=2 SV=1
trembl
ID A0A067KIQ0
description CASP-like protein OS=Jatropha curcas GN=JCGZ_09171 PE=3 SV=1
Gene Ontology
ID GO:0005886
description casp-like protein 1b2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_032717_030 0.0 - - PREDICTED: CASP-like protein 1B2 [Jatropha curcas]
2 Hb_003073_020 0.0486177316 - - protein binding protein, putative [Ricinus communis]
3 Hb_005433_050 0.0657155807 - - PREDICTED: uncharacterized protein At1g66480-like [Populus euphratica]
4 Hb_022115_030 0.0692946489 - - PREDICTED: umecyanin-like [Jatropha curcas]
5 Hb_020141_020 0.074871908 - - -
6 Hb_100786_010 0.075881334 - - hypothetical protein B456_008G202600 [Gossypium raimondii]
7 Hb_000828_030 0.076934621 - - PREDICTED: secoisolariciresinol dehydrogenase-like [Jatropha curcas]
8 Hb_000483_020 0.0804789586 - - PREDICTED: 7-deoxyloganetic acid glucosyltransferase-like isoform X2 [Jatropha curcas]
9 Hb_039363_010 0.0834356792 - - PREDICTED: cytochrome P450 CYP82D47-like [Jatropha curcas]
10 Hb_004592_020 0.0841374364 - - PREDICTED: non-specific lipid-transfer protein 1-like [Jatropha curcas]
11 Hb_018709_010 0.08534042 - - PREDICTED: cytochrome P450 CYP82D47-like [Jatropha curcas]
12 Hb_000589_280 0.0875273339 - - PREDICTED: glycerol-3-phosphate acyltransferase 5 [Jatropha curcas]
13 Hb_010358_010 0.0884402361 - - PREDICTED: cytochrome P450 CYP82D47-like [Jatropha curcas]
14 Hb_023732_020 0.0889837701 - - PREDICTED: fatty acyl-CoA reductase 3-like [Jatropha curcas]
15 Hb_002835_020 0.0895742297 - - PREDICTED: cytochrome P450 71A1-like [Jatropha curcas]
16 Hb_028013_010 0.0901574408 - - alcohol dehydrogenase, putative [Ricinus communis]
17 Hb_023080_010 0.0902847098 - - PREDICTED: probable serine incorporator [Jatropha curcas]
18 Hb_000229_080 0.0915152715 - - PREDICTED: cytochrome P450 CYP82D47-like [Jatropha curcas]
19 Hb_004981_020 0.0918429938 - - PREDICTED: uncharacterized protein LOC103706119 [Phoenix dactylifera]
20 Hb_106528_020 0.091849022 - - Cationic peroxidase 2 precursor [Theobroma cacao]

Gene co-expression network

sample Hb_032717_030 Hb_032717_030 Hb_003073_020 Hb_003073_020 Hb_032717_030--Hb_003073_020 Hb_005433_050 Hb_005433_050 Hb_032717_030--Hb_005433_050 Hb_022115_030 Hb_022115_030 Hb_032717_030--Hb_022115_030 Hb_020141_020 Hb_020141_020 Hb_032717_030--Hb_020141_020 Hb_100786_010 Hb_100786_010 Hb_032717_030--Hb_100786_010 Hb_000828_030 Hb_000828_030 Hb_032717_030--Hb_000828_030 Hb_023732_020 Hb_023732_020 Hb_003073_020--Hb_023732_020 Hb_039363_010 Hb_039363_010 Hb_003073_020--Hb_039363_010 Hb_000828_020 Hb_000828_020 Hb_003073_020--Hb_000828_020 Hb_002835_020 Hb_002835_020 Hb_003073_020--Hb_002835_020 Hb_003073_020--Hb_005433_050 Hb_000203_240 Hb_000203_240 Hb_005433_050--Hb_000203_240 Hb_106528_020 Hb_106528_020 Hb_005433_050--Hb_106528_020 Hb_010358_010 Hb_010358_010 Hb_005433_050--Hb_010358_010 Hb_000563_060 Hb_000563_060 Hb_005433_050--Hb_000563_060 Hb_002944_020 Hb_002944_020 Hb_005433_050--Hb_002944_020 Hb_000229_080 Hb_000229_080 Hb_005433_050--Hb_000229_080 Hb_000120_700 Hb_000120_700 Hb_022115_030--Hb_000120_700 Hb_022115_030--Hb_005433_050 Hb_022115_030--Hb_003073_020 Hb_022115_030--Hb_023732_020 Hb_000483_020 Hb_000483_020 Hb_022115_030--Hb_000483_020 Hb_018709_010 Hb_018709_010 Hb_020141_020--Hb_018709_010 Hb_000563_080 Hb_000563_080 Hb_020141_020--Hb_000563_080 Hb_003188_020 Hb_003188_020 Hb_020141_020--Hb_003188_020 Hb_020141_020--Hb_010358_010 Hb_153208_010 Hb_153208_010 Hb_020141_020--Hb_153208_010 Hb_014034_020 Hb_014034_020 Hb_020141_020--Hb_014034_020 Hb_000589_280 Hb_000589_280 Hb_100786_010--Hb_000589_280 Hb_100786_010--Hb_018709_010 Hb_010839_040 Hb_010839_040 Hb_100786_010--Hb_010839_040 Hb_100786_010--Hb_020141_020 Hb_000462_100 Hb_000462_100 Hb_100786_010--Hb_000462_100 Hb_002835_030 Hb_002835_030 Hb_100786_010--Hb_002835_030 Hb_000828_030--Hb_020141_020 Hb_000828_030--Hb_010358_010 Hb_000828_030--Hb_106528_020 Hb_000828_030--Hb_153208_010 Hb_000828_030--Hb_005433_050 Hb_038238_010 Hb_038238_010 Hb_000828_030--Hb_038238_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.526717 0 0.108616 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 13.699 0.132504

CAGE analysis