Hb_000229_080

Information

Type -
Description -
Location Contig229: 118978-120164
Sequence    

Annotation

kegg
ID vvi:100252572
description cytochrome P450 CYP82D47
nr
ID XP_012085830.1
description PREDICTED: cytochrome P450 CYP82D47-like [Jatropha curcas]
swissprot
ID O49859
description Cytochrome P450 82A4 OS=Glycine max GN=CYP82A4 PE=2 SV=1
trembl
ID A0A067JR41
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17505 PE=3 SV=1
Gene Ontology
ID GO:0005506
description cytochrome p450 cyp82d47-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000229_080 0.0 - - PREDICTED: cytochrome P450 CYP82D47-like [Jatropha curcas]
2 Hb_000500_190 0.0286968716 - - hypothetical protein JCGZ_21655 [Jatropha curcas]
3 Hb_014034_020 0.0493076893 - - hypothetical protein POPTR_0075s00200g, partial [Populus trichocarpa]
4 Hb_004254_070 0.0534375536 transcription factor TF Family: NAC hypothetical protein POPTR_0015s03700g [Populus trichocarpa]
5 Hb_000563_060 0.0588234499 - - PREDICTED: uncharacterized protein LOC100306381 isoform X1 [Glycine max]
6 Hb_003188_020 0.0599713151 - - chitinase, putative [Ricinus communis]
7 Hb_000446_100 0.0603677106 - - PREDICTED: protein NUCLEAR FUSION DEFECTIVE 4-like [Jatropha curcas]
8 Hb_005433_050 0.0623997546 - - PREDICTED: uncharacterized protein At1g66480-like [Populus euphratica]
9 Hb_002835_020 0.06288579 - - PREDICTED: cytochrome P450 71A1-like [Jatropha curcas]
10 Hb_003334_080 0.0648803957 - - Reticuline oxidase precursor, putative [Ricinus communis]
11 Hb_039363_010 0.0667058489 - - PREDICTED: cytochrome P450 CYP82D47-like [Jatropha curcas]
12 Hb_153208_010 0.0668973527 - - Cationic peroxidase 2 precursor, putative [Ricinus communis]
13 Hb_001456_040 0.0673880756 - - NAD dependent epimerase/dehydratase, putative [Ricinus communis]
14 Hb_000388_160 0.0682400492 - - xyloglucan endo-1 family protein [Populus trichocarpa]
15 Hb_001301_020 0.0704182001 - - hypothetical protein JCGZ_06575 [Jatropha curcas]
16 Hb_002944_020 0.0710852645 transcription factor TF Family: bZIP hypothetical protein POPTR_0006s05770g, partial [Populus trichocarpa]
17 Hb_000025_250 0.0725635128 - - PREDICTED: flavonoid 3',5'-hydroxylase 2-like [Jatropha curcas]
18 Hb_000203_240 0.0734346741 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
19 Hb_002553_170 0.073977288 - - PREDICTED: early nodulin-75-like [Jatropha curcas]
20 Hb_020480_050 0.0763531266 - - putative wall-associated kinase family protein [Populus trichocarpa]

Gene co-expression network

sample Hb_000229_080 Hb_000229_080 Hb_000500_190 Hb_000500_190 Hb_000229_080--Hb_000500_190 Hb_014034_020 Hb_014034_020 Hb_000229_080--Hb_014034_020 Hb_004254_070 Hb_004254_070 Hb_000229_080--Hb_004254_070 Hb_000563_060 Hb_000563_060 Hb_000229_080--Hb_000563_060 Hb_003188_020 Hb_003188_020 Hb_000229_080--Hb_003188_020 Hb_000446_100 Hb_000446_100 Hb_000229_080--Hb_000446_100 Hb_000500_190--Hb_014034_020 Hb_000500_190--Hb_004254_070 Hb_000500_190--Hb_003188_020 Hb_000500_190--Hb_000446_100 Hb_001301_020 Hb_001301_020 Hb_000500_190--Hb_001301_020 Hb_014034_020--Hb_004254_070 Hb_014034_020--Hb_003188_020 Hb_014034_020--Hb_000446_100 Hb_014034_020--Hb_001301_020 Hb_000025_250 Hb_000025_250 Hb_014034_020--Hb_000025_250 Hb_004254_070--Hb_000446_100 Hb_004254_070--Hb_003188_020 Hb_004254_070--Hb_001301_020 Hb_004254_070--Hb_000025_250 Hb_004190_030 Hb_004190_030 Hb_000563_060--Hb_004190_030 Hb_002835_020 Hb_002835_020 Hb_000563_060--Hb_002835_020 Hb_001140_330 Hb_001140_330 Hb_000563_060--Hb_001140_330 Hb_039363_010 Hb_039363_010 Hb_000563_060--Hb_039363_010 Hb_003119_110 Hb_003119_110 Hb_000563_060--Hb_003119_110 Hb_153208_010 Hb_153208_010 Hb_000563_060--Hb_153208_010 Hb_003188_020--Hb_001301_020 Hb_000563_080 Hb_000563_080 Hb_003188_020--Hb_000563_080 Hb_003188_020--Hb_000446_100 Hb_003188_020--Hb_153208_010 Hb_000446_100--Hb_001301_020 Hb_001456_040 Hb_001456_040 Hb_000446_100--Hb_001456_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 2.16831 1.11295 0.338957 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 83.4433 0.34358

CAGE analysis