Hb_010839_040

Information

Type -
Description -
Location Contig10839: 36373-36762
Sequence    

Annotation

kegg
ID tcc:TCM_020006
description hypothetical protein
nr
ID KDP43858.1
description hypothetical protein JCGZ_20868 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L9F4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20868 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010839_040 0.0 - - hypothetical protein JCGZ_20868 [Jatropha curcas]
2 Hb_000462_100 0.0061553858 - - Leucoanthocyanidin dioxygenase, putative [Ricinus communis]
3 Hb_002835_030 0.0160208668 - - PREDICTED: lysM domain receptor-like kinase 4 [Vitis vinifera]
4 Hb_000589_280 0.0236079736 - - PREDICTED: glycerol-3-phosphate acyltransferase 5 [Jatropha curcas]
5 Hb_002758_020 0.0389018801 - - PREDICTED: putative auxin efflux carrier component 5 [Jatropha curcas]
6 Hb_100786_010 0.0472633629 - - hypothetical protein B456_008G202600 [Gossypium raimondii]
7 Hb_166232_010 0.0623791911 - - hypothetical protein JCGZ_22831 [Jatropha curcas]
8 Hb_005464_040 0.0647938614 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
9 Hb_000563_080 0.0671436601 - - -
10 Hb_001165_040 0.0725677793 - - hypothetical protein POPTR_0009s10120g [Populus trichocarpa]
11 Hb_020141_020 0.0780071098 - - -
12 Hb_001301_020 0.0790941846 - - hypothetical protein JCGZ_06575 [Jatropha curcas]
13 Hb_018709_010 0.0827015081 - - PREDICTED: cytochrome P450 CYP82D47-like [Jatropha curcas]
14 Hb_020025_020 0.0827817591 - - SENESCENCE-RELATED GENE 1 family protein [Populus trichocarpa]
15 Hb_001930_060 0.086501758 - - PREDICTED: cytochrome P450 71D9-like [Fragaria vesca subsp. vesca]
16 Hb_003188_020 0.087592512 - - chitinase, putative [Ricinus communis]
17 Hb_000025_250 0.0929173585 - - PREDICTED: flavonoid 3',5'-hydroxylase 2-like [Jatropha curcas]
18 Hb_028013_010 0.0963507526 - - alcohol dehydrogenase, putative [Ricinus communis]
19 Hb_032717_030 0.0963662294 - - PREDICTED: CASP-like protein 1B2 [Jatropha curcas]
20 Hb_153208_010 0.0976361368 - - Cationic peroxidase 2 precursor, putative [Ricinus communis]

Gene co-expression network

sample Hb_010839_040 Hb_010839_040 Hb_000462_100 Hb_000462_100 Hb_010839_040--Hb_000462_100 Hb_002835_030 Hb_002835_030 Hb_010839_040--Hb_002835_030 Hb_000589_280 Hb_000589_280 Hb_010839_040--Hb_000589_280 Hb_002758_020 Hb_002758_020 Hb_010839_040--Hb_002758_020 Hb_100786_010 Hb_100786_010 Hb_010839_040--Hb_100786_010 Hb_166232_010 Hb_166232_010 Hb_010839_040--Hb_166232_010 Hb_000462_100--Hb_002835_030 Hb_000462_100--Hb_000589_280 Hb_000462_100--Hb_002758_020 Hb_000462_100--Hb_100786_010 Hb_005464_040 Hb_005464_040 Hb_000462_100--Hb_005464_040 Hb_002835_030--Hb_002758_020 Hb_002835_030--Hb_000589_280 Hb_002835_030--Hb_166232_010 Hb_002835_030--Hb_100786_010 Hb_000589_280--Hb_100786_010 Hb_000589_280--Hb_002758_020 Hb_000589_280--Hb_005464_040 Hb_002758_020--Hb_166232_010 Hb_000563_080 Hb_000563_080 Hb_002758_020--Hb_000563_080 Hb_018709_010 Hb_018709_010 Hb_100786_010--Hb_018709_010 Hb_020141_020 Hb_020141_020 Hb_100786_010--Hb_020141_020 Hb_166232_010--Hb_000563_080 Hb_001930_060 Hb_001930_060 Hb_166232_010--Hb_001930_060 Hb_001301_020 Hb_001301_020 Hb_166232_010--Hb_001301_020 Hb_003188_020 Hb_003188_020 Hb_166232_010--Hb_003188_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.188407 0 0.144223 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 4.74454 0

CAGE analysis