Hb_023080_010

Information

Type -
Description -
Location Contig23080: 8771-11657
Sequence    

Annotation

kegg
ID rcu:RCOM_0926750
description hypothetical protein
nr
ID XP_012078652.1
description PREDICTED: probable serine incorporator [Jatropha curcas]
swissprot
ID Q5R533
description Serine incorporator 3 OS=Pongo abelii GN=SERINC3 PE=2 SV=1
trembl
ID A0A067KJ77
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13230 PE=4 SV=1
Gene Ontology
ID GO:0016020
description probable serine incorporator

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_023080_010 0.0 - - PREDICTED: probable serine incorporator [Jatropha curcas]
2 Hb_023732_020 0.0635296819 - - PREDICTED: fatty acyl-CoA reductase 3-like [Jatropha curcas]
3 Hb_003968_020 0.0709243824 - - PREDICTED: limonoid UDP-glucosyltransferase-like [Glycine max]
4 Hb_003073_020 0.0784195057 - - protein binding protein, putative [Ricinus communis]
5 Hb_032717_030 0.0902847098 - - PREDICTED: CASP-like protein 1B2 [Jatropha curcas]
6 Hb_039562_010 0.0903631674 - - PREDICTED: protein SRG1-like [Jatropha curcas]
7 Hb_006620_040 0.0985918256 - - PREDICTED: probable 6-phosphogluconolactonase 1 [Jatropha curcas]
8 Hb_000907_190 0.1004188621 - - PREDICTED: uncharacterized protein At4g15970-like [Jatropha curcas]
9 Hb_000483_020 0.1016339118 - - PREDICTED: 7-deoxyloganetic acid glucosyltransferase-like isoform X2 [Jatropha curcas]
10 Hb_178389_020 0.1043426926 - - PREDICTED: cytochrome P450 86B1-like [Jatropha curcas]
11 Hb_022115_030 0.1092885547 - - PREDICTED: umecyanin-like [Jatropha curcas]
12 Hb_001288_010 0.1109993783 - - -
13 Hb_058620_010 0.1113600231 - - cytochrome P450, putative [Ricinus communis]
14 Hb_004097_080 0.1121145318 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g36180 isoform X1 [Nicotiana tomentosiformis]
15 Hb_002835_030 0.1168765787 - - PREDICTED: lysM domain receptor-like kinase 4 [Vitis vinifera]
16 Hb_010839_040 0.1169842413 - - hypothetical protein JCGZ_20868 [Jatropha curcas]
17 Hb_000462_100 0.1174551843 - - Leucoanthocyanidin dioxygenase, putative [Ricinus communis]
18 Hb_000076_200 0.1186422504 - - conserved hypothetical protein [Ricinus communis]
19 Hb_000712_060 0.1194727774 - - PREDICTED: uncharacterized protein LOC105631517 [Jatropha curcas]
20 Hb_000589_280 0.1206158603 - - PREDICTED: glycerol-3-phosphate acyltransferase 5 [Jatropha curcas]

Gene co-expression network

sample Hb_023080_010 Hb_023080_010 Hb_023732_020 Hb_023732_020 Hb_023080_010--Hb_023732_020 Hb_003968_020 Hb_003968_020 Hb_023080_010--Hb_003968_020 Hb_003073_020 Hb_003073_020 Hb_023080_010--Hb_003073_020 Hb_032717_030 Hb_032717_030 Hb_023080_010--Hb_032717_030 Hb_039562_010 Hb_039562_010 Hb_023080_010--Hb_039562_010 Hb_006620_040 Hb_006620_040 Hb_023080_010--Hb_006620_040 Hb_023732_020--Hb_003073_020 Hb_000712_060 Hb_000712_060 Hb_023732_020--Hb_000712_060 Hb_000828_020 Hb_000828_020 Hb_023732_020--Hb_000828_020 Hb_023732_020--Hb_032717_030 Hb_023732_020--Hb_039562_010 Hb_000076_200 Hb_000076_200 Hb_003968_020--Hb_000076_200 Hb_003968_020--Hb_006620_040 Hb_003968_020--Hb_039562_010 Hb_000281_200 Hb_000281_200 Hb_003968_020--Hb_000281_200 Hb_001288_010 Hb_001288_010 Hb_003968_020--Hb_001288_010 Hb_003073_020--Hb_032717_030 Hb_039363_010 Hb_039363_010 Hb_003073_020--Hb_039363_010 Hb_003073_020--Hb_000828_020 Hb_002835_020 Hb_002835_020 Hb_003073_020--Hb_002835_020 Hb_005433_050 Hb_005433_050 Hb_003073_020--Hb_005433_050 Hb_032717_030--Hb_005433_050 Hb_022115_030 Hb_022115_030 Hb_032717_030--Hb_022115_030 Hb_020141_020 Hb_020141_020 Hb_032717_030--Hb_020141_020 Hb_100786_010 Hb_100786_010 Hb_032717_030--Hb_100786_010 Hb_000828_030 Hb_000828_030 Hb_032717_030--Hb_000828_030 Hb_000318_440 Hb_000318_440 Hb_039562_010--Hb_000318_440 Hb_004693_010 Hb_004693_010 Hb_039562_010--Hb_004693_010 Hb_135392_010 Hb_135392_010 Hb_039562_010--Hb_135392_010 Hb_004097_080 Hb_004097_080 Hb_039562_010--Hb_004097_080 Hb_002173_080 Hb_002173_080 Hb_039562_010--Hb_002173_080 Hb_006620_040--Hb_039562_010 Hb_000466_090 Hb_000466_090 Hb_006620_040--Hb_000466_090 Hb_003189_030 Hb_003189_030 Hb_006620_040--Hb_003189_030 Hb_000907_190 Hb_000907_190 Hb_006620_040--Hb_000907_190
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0721033 0 0.0623005 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 2.03203 0.0600045

CAGE analysis