Hb_039655_010

Information

Type -
Description -
Location Contig39655: 1391-9164
Sequence    

Annotation

kegg
ID mdm:103416333
description BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1-like
nr
ID XP_008352813.1
description PREDICTED: BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1-like [Malus domestica]
swissprot
ID Q9C821
description Proline-rich receptor-like protein kinase PERK15 OS=Arabidopsis thaliana GN=PERK15 PE=2 SV=1
trembl
ID A0A0D3FFQ5
description Uncharacterized protein OS=Oryza barthii PE=4 SV=1
Gene Ontology
ID GO:0004672
description serine-threonine protein plant-

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_39585: 4811-5606
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_039655_010 0.0 - - PREDICTED: BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1-like [Malus domestica]
2 Hb_004204_160 0.0768917668 - - S-locus-specific glycoprotein S6 precursor, putative [Ricinus communis]
3 Hb_005356_010 0.0901895051 - - hypothetical protein POPTR_0003s16550g [Populus trichocarpa]
4 Hb_000281_200 0.0915049631 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO2 [Jatropha curcas]
5 Hb_178389_020 0.0936159871 - - PREDICTED: cytochrome P450 86B1-like [Jatropha curcas]
6 Hb_004564_010 0.0966404848 - - receptor-kinase, putative [Ricinus communis]
7 Hb_001134_040 0.0979839132 - - PREDICTED: EG45-like domain containing protein [Jatropha curcas]
8 Hb_001901_090 0.1005498689 - - metal ion binding protein, putative [Ricinus communis]
9 Hb_042664_010 0.1010212479 - - hypothetical protein POPTR_0001s07640g, partial [Populus trichocarpa]
10 Hb_005464_040 0.1020025323 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
11 Hb_000712_070 0.1031453652 - - conserved hypothetical protein [Ricinus communis]
12 Hb_001288_010 0.1053262239 - - -
13 Hb_007527_020 0.1057649028 - - PREDICTED: feruloyl CoA ortho-hydroxylase 1 [Jatropha curcas]
14 Hb_002805_230 0.1068628177 - - PREDICTED: protein TRANSPARENT TESTA 12 isoform X1 [Jatropha curcas]
15 Hb_000243_330 0.1069496806 - - conserved hypothetical protein [Ricinus communis]
16 Hb_000025_250 0.1086311758 - - PREDICTED: flavonoid 3',5'-hydroxylase 2-like [Jatropha curcas]
17 Hb_003090_070 0.1093111646 - - PREDICTED: laccase-7 [Jatropha curcas]
18 Hb_002534_080 0.109466998 - - zinc finger protein, putative [Ricinus communis]
19 Hb_159769_010 0.1102106016 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO1 [Jatropha curcas]
20 Hb_000141_210 0.1114718693 - - PREDICTED: 36.4 kDa proline-rich protein-like [Camelina sativa]

Gene co-expression network

sample Hb_039655_010 Hb_039655_010 Hb_004204_160 Hb_004204_160 Hb_039655_010--Hb_004204_160 Hb_005356_010 Hb_005356_010 Hb_039655_010--Hb_005356_010 Hb_000281_200 Hb_000281_200 Hb_039655_010--Hb_000281_200 Hb_178389_020 Hb_178389_020 Hb_039655_010--Hb_178389_020 Hb_004564_010 Hb_004564_010 Hb_039655_010--Hb_004564_010 Hb_001134_040 Hb_001134_040 Hb_039655_010--Hb_001134_040 Hb_004204_160--Hb_001134_040 Hb_004097_080 Hb_004097_080 Hb_004204_160--Hb_004097_080 Hb_000712_070 Hb_000712_070 Hb_004204_160--Hb_000712_070 Hb_058620_010 Hb_058620_010 Hb_004204_160--Hb_058620_010 Hb_003090_070 Hb_003090_070 Hb_004204_160--Hb_003090_070 Hb_007527_020 Hb_007527_020 Hb_005356_010--Hb_007527_020 Hb_005356_010--Hb_000281_200 Hb_000301_030 Hb_000301_030 Hb_005356_010--Hb_000301_030 Hb_005356_010--Hb_178389_020 Hb_001544_040 Hb_001544_040 Hb_005356_010--Hb_001544_040 Hb_001288_010 Hb_001288_010 Hb_005356_010--Hb_001288_010 Hb_000281_200--Hb_001288_010 Hb_000281_200--Hb_007527_020 Hb_003968_020 Hb_003968_020 Hb_000281_200--Hb_003968_020 Hb_000281_200--Hb_178389_020 Hb_178389_020--Hb_004564_010 Hb_001442_080 Hb_001442_080 Hb_178389_020--Hb_001442_080 Hb_178389_020--Hb_001288_010 Hb_107258_010 Hb_107258_010 Hb_178389_020--Hb_107258_010 Hb_002900_020 Hb_002900_020 Hb_178389_020--Hb_002900_020 Hb_004564_010--Hb_107258_010 Hb_004564_010--Hb_001442_080 Hb_001863_290 Hb_001863_290 Hb_004564_010--Hb_001863_290 Hb_002615_050 Hb_002615_050 Hb_004564_010--Hb_002615_050 Hb_004564_010--Hb_001288_010 Hb_002805_230 Hb_002805_230 Hb_001134_040--Hb_002805_230 Hb_001134_040--Hb_058620_010 Hb_001134_040--Hb_003090_070 Hb_001134_040--Hb_000712_070 Hb_007417_020 Hb_007417_020 Hb_001134_040--Hb_007417_020 Hb_135392_010 Hb_135392_010 Hb_001134_040--Hb_135392_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0325455 0.305928 0.0873131 0.151234 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.0276832 4.97655 0.0308644

CAGE analysis