Hb_000216_030

Information

Type -
Description -
Location Contig216: 70506-85838
Sequence    

Annotation

kegg
ID rcu:RCOM_0952140
description aldehyde oxidase, putative
nr
ID XP_002515843.1
description aldehyde oxidase, putative [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9RQ24
description Aldehyde oxidase, putative OS=Ricinus communis GN=RCOM_0952140 PE=4 SV=1
Gene Ontology
ID GO:0005506
description indole-3-acetaldehyde oxidase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_22353: 52872-72354 , PASA_asmbl_22355: 52875-119383
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000216_030 0.0 - - aldehyde oxidase, putative [Ricinus communis]
2 Hb_006916_190 0.2022396234 - - ubiquitin-protein ligase, putative [Ricinus communis]
3 Hb_044380_020 0.2175334774 - - NBS-LRR resistance protein RGH1 [Manihot esculenta]
4 Hb_001086_030 0.220475271 - - Disease resistance protein RPS5, putative [Ricinus communis]
5 Hb_003517_010 0.2231272583 - - PREDICTED: ABC transporter C family member 3-like isoform X1 [Jatropha curcas]
6 Hb_008749_090 0.2268452951 - - hypothetical protein CICLE_v10017161mg [Citrus clementina]
7 Hb_001123_010 0.2354527574 - - conserved hypothetical protein [Ricinus communis]
8 Hb_000343_100 0.2379151942 - - PREDICTED: regulator of telomere elongation helicase 1 homolog [Jatropha curcas]
9 Hb_000875_070 0.2419344678 - - -
10 Hb_000783_030 0.247271057 - - tfiif-alpha, putative [Ricinus communis]
11 Hb_003098_080 0.2476050248 - - -
12 Hb_172939_010 0.250145398 - - unknown [Picea sitchensis]
13 Hb_169586_010 0.2510920659 - - Acid phosphatase/vanadium-dependent haloperoxidase-related protein [Theobroma cacao]
14 Hb_000022_140 0.2525659505 - - hypothetical protein MIMGU_mgv1a009920mg [Erythranthe guttata]
15 Hb_010068_050 0.2539017582 - - PREDICTED: uncharacterized protein LOC105632963 [Jatropha curcas]
16 Hb_099990_010 0.2590348273 - - PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 11 [Vitis vinifera]
17 Hb_001780_130 0.259919684 - - hypothetical protein JCGZ_08545 [Jatropha curcas]
18 Hb_001673_100 0.2602751685 - - PREDICTED: putative phosphatidylglycerol/phosphatidylinositol transfer protein DDB_G0282179 [Jatropha curcas]
19 Hb_000138_020 0.2604296473 - - PREDICTED: peroxidase A2-like [Jatropha curcas]
20 Hb_002908_060 0.2611318753 - - unnamed protein product, partial [Coffea canephora]

Gene co-expression network

sample Hb_000216_030 Hb_000216_030 Hb_006916_190 Hb_006916_190 Hb_000216_030--Hb_006916_190 Hb_044380_020 Hb_044380_020 Hb_000216_030--Hb_044380_020 Hb_001086_030 Hb_001086_030 Hb_000216_030--Hb_001086_030 Hb_003517_010 Hb_003517_010 Hb_000216_030--Hb_003517_010 Hb_008749_090 Hb_008749_090 Hb_000216_030--Hb_008749_090 Hb_001123_010 Hb_001123_010 Hb_000216_030--Hb_001123_010 Hb_172939_010 Hb_172939_010 Hb_006916_190--Hb_172939_010 Hb_006916_190--Hb_008749_090 Hb_000816_020 Hb_000816_020 Hb_006916_190--Hb_000816_020 Hb_012788_010 Hb_012788_010 Hb_006916_190--Hb_012788_010 Hb_168386_010 Hb_168386_010 Hb_006916_190--Hb_168386_010 Hb_044380_020--Hb_001086_030 Hb_000875_070 Hb_000875_070 Hb_044380_020--Hb_000875_070 Hb_000668_110 Hb_000668_110 Hb_044380_020--Hb_000668_110 Hb_006452_240 Hb_006452_240 Hb_044380_020--Hb_006452_240 Hb_003938_110 Hb_003938_110 Hb_044380_020--Hb_003938_110 Hb_000414_180 Hb_000414_180 Hb_044380_020--Hb_000414_180 Hb_006096_020 Hb_006096_020 Hb_001086_030--Hb_006096_020 Hb_001086_030--Hb_006452_240 Hb_001086_030--Hb_003517_010 Hb_102011_010 Hb_102011_010 Hb_001086_030--Hb_102011_010 Hb_003517_010--Hb_008749_090 Hb_149515_010 Hb_149515_010 Hb_003517_010--Hb_149515_010 Hb_005389_190 Hb_005389_190 Hb_003517_010--Hb_005389_190 Hb_003517_010--Hb_000816_020 Hb_003517_010--Hb_006096_020 Hb_029904_010 Hb_029904_010 Hb_003517_010--Hb_029904_010 Hb_008749_090--Hb_149515_010 Hb_001780_130 Hb_001780_130 Hb_008749_090--Hb_001780_130 Hb_000343_100 Hb_000343_100 Hb_008749_090--Hb_000343_100 Hb_008749_090--Hb_000816_020 Hb_001004_100 Hb_001004_100 Hb_001123_010--Hb_001004_100 Hb_000138_020 Hb_000138_020 Hb_001123_010--Hb_000138_020 Hb_006141_030 Hb_006141_030 Hb_001123_010--Hb_006141_030 Hb_000453_240 Hb_000453_240 Hb_001123_010--Hb_000453_240 Hb_002026_080 Hb_002026_080 Hb_001123_010--Hb_002026_080 Hb_012753_190 Hb_012753_190 Hb_001123_010--Hb_012753_190
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0558196 0.126774 0.016717 0.35799 0.0642287 0.167953
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0511218 0.0402069 0.369859 1.50398 0.739906

CAGE analysis