Hb_168386_010

Information

Type -
Description -
Location Contig168386: 9-647
Sequence    

Annotation

kegg
ID rcu:RCOM_0885080
description Disease resistance protein RPS5, putative
nr
ID XP_002522629.1
description Disease resistance protein RPS5, putative [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9S9G0
description Disease resistance protein RPS5, putative OS=Ricinus communis GN=RCOM_0885080 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_168386_010 0.0 - - Disease resistance protein RPS5, putative [Ricinus communis]
2 Hb_172939_010 0.1806168691 - - unknown [Picea sitchensis]
3 Hb_006916_190 0.221013933 - - ubiquitin-protein ligase, putative [Ricinus communis]
4 Hb_002639_010 0.2307751434 - - pseudouridylate synthase, putative [Ricinus communis]
5 Hb_001304_130 0.2325587168 transcription factor TF Family: GRAS PREDICTED: scarecrow-like transcription factor PAT1 [Jatropha curcas]
6 Hb_009642_010 0.2369598553 - - Disease resistance protein RFL1, putative [Ricinus communis]
7 Hb_121441_010 0.2395488141 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein RGA3 [Jatropha curcas]
8 Hb_000816_020 0.2406048384 desease resistance Gene Name: NB-ARC unnamed protein product [Coffea canephora]
9 Hb_127507_010 0.243408362 - - PREDICTED: uncharacterized protein LOC104814513 [Tarenaya hassleriana]
10 Hb_002122_050 0.2450547189 - - PREDICTED: putative disease resistance protein RGA3 [Jatropha curcas]
11 Hb_000046_610 0.2492785608 - - PREDICTED: putative cullin-like protein 2 isoform X3 [Populus euphratica]
12 Hb_010761_030 0.2517815938 - - cytochrome P450, putative [Ricinus communis]
13 Hb_121992_010 0.2519199941 - - hypothetical protein POPTR_0005s04441g [Populus trichocarpa]
14 Hb_000149_090 0.2519730022 - - -
15 Hb_000875_070 0.2535570266 - - -
16 Hb_002122_040 0.2554628838 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein RGA3 [Jatropha curcas]
17 Hb_000982_120 0.2573887817 transcription factor TF Family: Orphans sensory transduction histidine kinase bacterial, putative [Ricinus communis]
18 Hb_000811_010 0.257544279 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF118 [Jatropha curcas]
19 Hb_002026_080 0.2577679884 desease resistance Gene Name: TIR_2 nucleoside-triphosphatase, putative [Ricinus communis]
20 Hb_059780_010 0.2578586853 - - PREDICTED: uncharacterized protein LOC104885482, partial [Beta vulgaris subsp. vulgaris]

Gene co-expression network

sample Hb_168386_010 Hb_168386_010 Hb_172939_010 Hb_172939_010 Hb_168386_010--Hb_172939_010 Hb_006916_190 Hb_006916_190 Hb_168386_010--Hb_006916_190 Hb_002639_010 Hb_002639_010 Hb_168386_010--Hb_002639_010 Hb_001304_130 Hb_001304_130 Hb_168386_010--Hb_001304_130 Hb_009642_010 Hb_009642_010 Hb_168386_010--Hb_009642_010 Hb_121441_010 Hb_121441_010 Hb_168386_010--Hb_121441_010 Hb_000120_880 Hb_000120_880 Hb_172939_010--Hb_000120_880 Hb_004310_170 Hb_004310_170 Hb_172939_010--Hb_004310_170 Hb_025668_020 Hb_025668_020 Hb_172939_010--Hb_025668_020 Hb_003640_010 Hb_003640_010 Hb_172939_010--Hb_003640_010 Hb_002122_050 Hb_002122_050 Hb_172939_010--Hb_002122_050 Hb_006916_190--Hb_172939_010 Hb_000216_030 Hb_000216_030 Hb_006916_190--Hb_000216_030 Hb_008749_090 Hb_008749_090 Hb_006916_190--Hb_008749_090 Hb_000816_020 Hb_000816_020 Hb_006916_190--Hb_000816_020 Hb_012788_010 Hb_012788_010 Hb_006916_190--Hb_012788_010 Hb_001652_070 Hb_001652_070 Hb_002639_010--Hb_001652_070 Hb_004894_010 Hb_004894_010 Hb_002639_010--Hb_004894_010 Hb_022819_010 Hb_022819_010 Hb_002639_010--Hb_022819_010 Hb_074670_010 Hb_074670_010 Hb_002639_010--Hb_074670_010 Hb_096811_010 Hb_096811_010 Hb_002639_010--Hb_096811_010 Hb_147218_010 Hb_147218_010 Hb_001304_130--Hb_147218_010 Hb_121992_010 Hb_121992_010 Hb_001304_130--Hb_121992_010 Hb_000875_070 Hb_000875_070 Hb_001304_130--Hb_000875_070 Hb_086336_010 Hb_086336_010 Hb_001304_130--Hb_086336_010 Hb_003216_070 Hb_003216_070 Hb_001304_130--Hb_003216_070 Hb_001486_060 Hb_001486_060 Hb_001304_130--Hb_001486_060 Hb_002122_040 Hb_002122_040 Hb_009642_010--Hb_002122_040 Hb_001105_200 Hb_001105_200 Hb_009642_010--Hb_001105_200 Hb_001158_080 Hb_001158_080 Hb_009642_010--Hb_001158_080 Hb_004712_020 Hb_004712_020 Hb_009642_010--Hb_004712_020 Hb_012807_140 Hb_012807_140 Hb_009642_010--Hb_012807_140 Hb_088916_010 Hb_088916_010 Hb_009642_010--Hb_088916_010 Hb_059780_010 Hb_059780_010 Hb_121441_010--Hb_059780_010 Hb_000149_090 Hb_000149_090 Hb_121441_010--Hb_000149_090 Hb_000982_120 Hb_000982_120 Hb_121441_010--Hb_000982_120 Hb_000675_040 Hb_000675_040 Hb_121441_010--Hb_000675_040 Hb_145211_010 Hb_145211_010 Hb_121441_010--Hb_145211_010 Hb_002566_010 Hb_002566_010 Hb_121441_010--Hb_002566_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.79271 0 1.10783 0 0.460441
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0965631 0.16534 2.83667 1.27833

CAGE analysis