Hb_074670_010

Information

Type -
Description -
Location Contig74670: 2084-5360
Sequence    

Annotation

kegg
ID csv:101218085
description uncharacterized LOC101218085
nr
ID CAN76923.1
description hypothetical protein VITISV_015625 [Vitis vinifera]
swissprot
ID -
description -
trembl
ID A5BID8
description Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_015625 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_074670_010 0.0 - - hypothetical protein VITISV_015625 [Vitis vinifera]
2 Hb_002639_010 0.2726343667 - - pseudouridylate synthase, putative [Ricinus communis]
3 Hb_034359_010 0.27902886 - - -
4 Hb_007718_020 0.2836356914 - - PREDICTED: receptor-like protein 12 [Camelina sativa]
5 Hb_166631_010 0.3068942 - - PREDICTED: uncharacterized protein LOC105801076 [Gossypium raimondii]
6 Hb_168386_010 0.3100093429 - - Disease resistance protein RPS5, putative [Ricinus communis]
7 Hb_001341_190 0.3118418835 - - PREDICTED: isovaleryl-CoA dehydrogenase, mitochondrial [Jatropha curcas]
8 Hb_000735_170 0.3159651483 - - hypothetical protein JCGZ_15146 [Jatropha curcas]
9 Hb_027760_090 0.3291388011 transcription factor TF Family: NAC NAC domain-containing protein, putative [Ricinus communis]
10 Hb_000875_090 0.3353204288 - - hypothetical protein VITISV_005326 [Vitis vinifera]
11 Hb_010810_110 0.3437493094 - - PREDICTED: LOW QUALITY PROTEIN: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
12 Hb_001652_070 0.3504988743 - - PREDICTED: uncharacterized protein LOC103439285 [Malus domestica]
13 Hb_001511_230 0.3556230969 - - PREDICTED: gibberellin 2-beta-dioxygenase 2 [Jatropha curcas]
14 Hb_127127_010 0.3575778747 - - -
15 Hb_002311_260 0.3593114039 - - PREDICTED: WD repeat-containing protein 43 [Jatropha curcas]
16 Hb_001320_020 0.3611626078 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103696607 [Phoenix dactylifera]
17 Hb_123964_010 0.3655351597 - - PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa [Jatropha curcas]
18 Hb_062317_020 0.367951412 - - conserved hypothetical protein [Ricinus communis]
19 Hb_000771_090 0.3690774644 - - hypothetical protein B456_012G003500 [Gossypium raimondii]
20 Hb_070758_010 0.3706852622 - - -

Gene co-expression network

sample Hb_074670_010 Hb_074670_010 Hb_002639_010 Hb_002639_010 Hb_074670_010--Hb_002639_010 Hb_034359_010 Hb_034359_010 Hb_074670_010--Hb_034359_010 Hb_007718_020 Hb_007718_020 Hb_074670_010--Hb_007718_020 Hb_166631_010 Hb_166631_010 Hb_074670_010--Hb_166631_010 Hb_168386_010 Hb_168386_010 Hb_074670_010--Hb_168386_010 Hb_001341_190 Hb_001341_190 Hb_074670_010--Hb_001341_190 Hb_001652_070 Hb_001652_070 Hb_002639_010--Hb_001652_070 Hb_002639_010--Hb_168386_010 Hb_004894_010 Hb_004894_010 Hb_002639_010--Hb_004894_010 Hb_022819_010 Hb_022819_010 Hb_002639_010--Hb_022819_010 Hb_096811_010 Hb_096811_010 Hb_002639_010--Hb_096811_010 Hb_105123_020 Hb_105123_020 Hb_034359_010--Hb_105123_020 Hb_062317_020 Hb_062317_020 Hb_034359_010--Hb_062317_020 Hb_001320_020 Hb_001320_020 Hb_034359_010--Hb_001320_020 Hb_034359_010--Hb_007718_020 Hb_056012_020 Hb_056012_020 Hb_034359_010--Hb_056012_020 Hb_001146_050 Hb_001146_050 Hb_007718_020--Hb_001146_050 Hb_004878_010 Hb_004878_010 Hb_007718_020--Hb_004878_010 Hb_033555_010 Hb_033555_010 Hb_007718_020--Hb_033555_010 Hb_050034_010 Hb_050034_010 Hb_007718_020--Hb_050034_010 Hb_007456_020 Hb_007456_020 Hb_007718_020--Hb_007456_020 Hb_000771_090 Hb_000771_090 Hb_007718_020--Hb_000771_090 Hb_008008_020 Hb_008008_020 Hb_166631_010--Hb_008008_020 Hb_000148_010 Hb_000148_010 Hb_166631_010--Hb_000148_010 Hb_000495_060 Hb_000495_060 Hb_166631_010--Hb_000495_060 Hb_012286_080 Hb_012286_080 Hb_166631_010--Hb_012286_080 Hb_000965_010 Hb_000965_010 Hb_166631_010--Hb_000965_010 Hb_006274_020 Hb_006274_020 Hb_166631_010--Hb_006274_020 Hb_172939_010 Hb_172939_010 Hb_168386_010--Hb_172939_010 Hb_006916_190 Hb_006916_190 Hb_168386_010--Hb_006916_190 Hb_001304_130 Hb_001304_130 Hb_168386_010--Hb_001304_130 Hb_009642_010 Hb_009642_010 Hb_168386_010--Hb_009642_010 Hb_121441_010 Hb_121441_010 Hb_168386_010--Hb_121441_010 Hb_000875_090 Hb_000875_090 Hb_001341_190--Hb_000875_090 Hb_007975_020 Hb_007975_020 Hb_001341_190--Hb_007975_020 Hb_002255_080 Hb_002255_080 Hb_001341_190--Hb_002255_080 Hb_001341_190--Hb_001652_070 Hb_001341_190--Hb_007718_020 Hb_000659_090 Hb_000659_090 Hb_001341_190--Hb_000659_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0442624 0 0.0380901 0 0.14451
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0562586 0 0.202456 0.117079

CAGE analysis