Hb_105123_020

Information

Type -
Description -
Location Contig105123: 37082-37386
Sequence    

Annotation

kegg
ID rcu:RCOM_0254650
description hypothetical protein
nr
ID XP_002530083.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9SVR4
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0254650 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_105123_020 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_034359_010 0.1806862559 - - -
3 Hb_007595_060 0.2738314282 - - conserved hypothetical protein [Ricinus communis]
4 Hb_001758_030 0.2813306785 - - hypothetical protein JCGZ_09181 [Jatropha curcas]
5 Hb_097981_010 0.2935232006 - - -
6 Hb_001519_230 0.3122539145 - - PREDICTED: disease resistance protein At4g27190-like [Jatropha curcas]
7 Hb_095399_010 0.3237694955 - - cytochrome b/f complex subunit IV [Sphagnum fimbriatum]
8 Hb_004041_010 0.327210351 - - conserved hypothetical protein [Ricinus communis]
9 Hb_012490_110 0.3290552232 - - PREDICTED: uncharacterized membrane protein C776.05 [Jatropha curcas]
10 Hb_056012_020 0.3327307907 - - -
11 Hb_062317_020 0.3377906965 - - conserved hypothetical protein [Ricinus communis]
12 Hb_007718_020 0.3533731188 - - PREDICTED: receptor-like protein 12 [Camelina sativa]
13 Hb_001320_020 0.3567363164 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103696607 [Phoenix dactylifera]
14 Hb_005241_020 0.3571113053 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103696607 [Phoenix dactylifera]
15 Hb_006422_030 0.3574199137 - - -
16 Hb_004947_070 0.3575469213 - - hypothetical protein CICLE_v100140161mg, partial [Citrus clementina]
17 Hb_005271_230 0.3611828951 - - PREDICTED: uncharacterized protein LOC105645849 isoform X4 [Jatropha curcas]
18 Hb_000771_090 0.3630027724 - - hypothetical protein B456_012G003500 [Gossypium raimondii]
19 Hb_004244_010 0.3679862349 - - hypothetical protein JCGZ_06191 [Jatropha curcas]
20 Hb_011310_090 0.374075184 - - PREDICTED: putative ATPase N2B isoform X3 [Vitis vinifera]

Gene co-expression network

sample Hb_105123_020 Hb_105123_020 Hb_034359_010 Hb_034359_010 Hb_105123_020--Hb_034359_010 Hb_007595_060 Hb_007595_060 Hb_105123_020--Hb_007595_060 Hb_001758_030 Hb_001758_030 Hb_105123_020--Hb_001758_030 Hb_097981_010 Hb_097981_010 Hb_105123_020--Hb_097981_010 Hb_001519_230 Hb_001519_230 Hb_105123_020--Hb_001519_230 Hb_095399_010 Hb_095399_010 Hb_105123_020--Hb_095399_010 Hb_062317_020 Hb_062317_020 Hb_034359_010--Hb_062317_020 Hb_001320_020 Hb_001320_020 Hb_034359_010--Hb_001320_020 Hb_007718_020 Hb_007718_020 Hb_034359_010--Hb_007718_020 Hb_074670_010 Hb_074670_010 Hb_034359_010--Hb_074670_010 Hb_056012_020 Hb_056012_020 Hb_034359_010--Hb_056012_020 Hb_002248_040 Hb_002248_040 Hb_007595_060--Hb_002248_040 Hb_007595_060--Hb_001519_230 Hb_126395_010 Hb_126395_010 Hb_007595_060--Hb_126395_010 Hb_007595_060--Hb_095399_010 Hb_000457_190 Hb_000457_190 Hb_007595_060--Hb_000457_190 Hb_001758_030--Hb_097981_010 Hb_004678_070 Hb_004678_070 Hb_001758_030--Hb_004678_070 Hb_004981_010 Hb_004981_010 Hb_001758_030--Hb_004981_010 Hb_181402_010 Hb_181402_010 Hb_001758_030--Hb_181402_010 Hb_003717_020 Hb_003717_020 Hb_001758_030--Hb_003717_020 Hb_097981_010--Hb_004678_070 Hb_097981_010--Hb_095399_010 Hb_097981_010--Hb_004981_010 Hb_097981_010--Hb_062317_020 Hb_079978_010 Hb_079978_010 Hb_001519_230--Hb_079978_010 Hb_101151_030 Hb_101151_030 Hb_001519_230--Hb_101151_030 Hb_144552_010 Hb_144552_010 Hb_001519_230--Hb_144552_010 Hb_106873_010 Hb_106873_010 Hb_001519_230--Hb_106873_010 Hb_006995_020 Hb_006995_020 Hb_001519_230--Hb_006995_020 Hb_041476_010 Hb_041476_010 Hb_095399_010--Hb_041476_010 Hb_002224_050 Hb_002224_050 Hb_095399_010--Hb_002224_050 Hb_000541_010 Hb_000541_010 Hb_095399_010--Hb_000541_010 Hb_003245_010 Hb_003245_010 Hb_095399_010--Hb_003245_010 Hb_165958_010 Hb_165958_010 Hb_095399_010--Hb_165958_010 Hb_117252_010 Hb_117252_010 Hb_095399_010--Hb_117252_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.799491 0 0.878879 0 4.09982
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.588607 2.38245

CAGE analysis