Hb_001519_230

Information

Type -
Description -
Location Contig1519: 265732-267282
Sequence    

Annotation

kegg
ID egr:104428992
description uncharacterized LOC104428992
nr
ID XP_012066788.1
description PREDICTED: disease resistance protein At4g27190-like [Jatropha curcas]
swissprot
ID Q5E9C0
description Ras suppressor protein 1 OS=Bos taurus GN=RSU1 PE=2 SV=1
trembl
ID A0A067L1X3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00273 PE=4 SV=1
Gene Ontology
ID GO:0032550
description disease resistance protein at4g27190-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001519_230 0.0 - - PREDICTED: disease resistance protein At4g27190-like [Jatropha curcas]
2 Hb_079978_010 0.2521883932 - - PREDICTED: peptidyl-prolyl cis-trans isomerase CYP71 isoform X1 [Nelumbo nucifera]
3 Hb_101151_030 0.2749121078 - - -
4 Hb_144552_010 0.275924765 - - CC-NBS-LRR protein, putative [Theobroma cacao]
5 Hb_007595_060 0.2766233887 - - conserved hypothetical protein [Ricinus communis]
6 Hb_106873_010 0.2773541293 - - -
7 Hb_006995_020 0.2884042557 - - hypothetical protein glysoja_017339 [Glycine soja]
8 Hb_005839_010 0.2926076444 - - 30S ribosomal protein s13 [Camellia sinensis]
9 Hb_103093_010 0.2935434705 - - PREDICTED: wall-associated receptor kinase 4-like [Elaeis guineensis]
10 Hb_002204_040 0.2960250561 - - hypothetical protein B456_008G181200 [Gossypium raimondii]
11 Hb_000589_320 0.2999308326 - - unnamed protein product [Vitis vinifera]
12 Hb_003623_020 0.3009007703 - - -
13 Hb_000671_040 0.3052656018 - - -
14 Hb_007083_050 0.3060949187 - - PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like isoform X2 [Nelumbo nucifera]
15 Hb_000805_300 0.3099712773 - - -
16 Hb_105123_020 0.3122539145 - - conserved hypothetical protein [Ricinus communis]
17 Hb_010172_060 0.314384166 - - PREDICTED: uncharacterized protein LOC105634266 [Jatropha curcas]
18 Hb_005318_020 0.3143940991 - - PREDICTED: lecithin-cholesterol acyltransferase-like 4 isoform X3 [Jatropha curcas]
19 Hb_018591_040 0.3174447872 - - PREDICTED: protein VAC14 homolog [Jatropha curcas]
20 Hb_001385_080 0.3178906595 - - -

Gene co-expression network

sample Hb_001519_230 Hb_001519_230 Hb_079978_010 Hb_079978_010 Hb_001519_230--Hb_079978_010 Hb_101151_030 Hb_101151_030 Hb_001519_230--Hb_101151_030 Hb_144552_010 Hb_144552_010 Hb_001519_230--Hb_144552_010 Hb_007595_060 Hb_007595_060 Hb_001519_230--Hb_007595_060 Hb_106873_010 Hb_106873_010 Hb_001519_230--Hb_106873_010 Hb_006995_020 Hb_006995_020 Hb_001519_230--Hb_006995_020 Hb_005318_020 Hb_005318_020 Hb_079978_010--Hb_005318_020 Hb_007083_050 Hb_007083_050 Hb_079978_010--Hb_007083_050 Hb_122567_020 Hb_122567_020 Hb_079978_010--Hb_122567_020 Hb_079978_010--Hb_101151_030 Hb_000805_300 Hb_000805_300 Hb_079978_010--Hb_000805_300 Hb_007447_020 Hb_007447_020 Hb_079978_010--Hb_007447_020 Hb_101151_030--Hb_000805_300 Hb_003623_020 Hb_003623_020 Hb_101151_030--Hb_003623_020 Hb_000002_030 Hb_000002_030 Hb_101151_030--Hb_000002_030 Hb_001454_110 Hb_001454_110 Hb_101151_030--Hb_001454_110 Hb_001235_060 Hb_001235_060 Hb_101151_030--Hb_001235_060 Hb_010172_060 Hb_010172_060 Hb_144552_010--Hb_010172_060 Hb_144552_010--Hb_003623_020 Hb_004947_070 Hb_004947_070 Hb_144552_010--Hb_004947_070 Hb_144552_010--Hb_101151_030 Hb_001969_050 Hb_001969_050 Hb_144552_010--Hb_001969_050 Hb_001676_040 Hb_001676_040 Hb_144552_010--Hb_001676_040 Hb_002248_040 Hb_002248_040 Hb_007595_060--Hb_002248_040 Hb_105123_020 Hb_105123_020 Hb_007595_060--Hb_105123_020 Hb_126395_010 Hb_126395_010 Hb_007595_060--Hb_126395_010 Hb_095399_010 Hb_095399_010 Hb_007595_060--Hb_095399_010 Hb_000457_190 Hb_000457_190 Hb_007595_060--Hb_000457_190 Hb_000671_040 Hb_000671_040 Hb_106873_010--Hb_000671_040 Hb_000589_320 Hb_000589_320 Hb_106873_010--Hb_000589_320 Hb_002204_040 Hb_002204_040 Hb_106873_010--Hb_002204_040 Hb_000291_130 Hb_000291_130 Hb_106873_010--Hb_000291_130 Hb_001579_040 Hb_001579_040 Hb_106873_010--Hb_001579_040 Hb_094132_010 Hb_094132_010 Hb_106873_010--Hb_094132_010 Hb_018591_040 Hb_018591_040 Hb_006995_020--Hb_018591_040 Hb_007044_280 Hb_007044_280 Hb_006995_020--Hb_007044_280 Hb_007659_010 Hb_007659_010 Hb_006995_020--Hb_007659_010 Hb_001377_440 Hb_001377_440 Hb_006995_020--Hb_001377_440 Hb_041813_070 Hb_041813_070 Hb_006995_020--Hb_041813_070 Hb_006995_020--Hb_001969_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0.0490601 0 0.300783
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.00943337 0.0495317

CAGE analysis