Hb_106873_010

Information

Type -
Description -
Location Contig106873: 2082-3095
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID GO:0016301
description g-type lectin s-receptor-like serine threonine-protein kinase at1g11410

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_106873_010 0.0 - - -
2 Hb_000671_040 0.1078759866 - - -
3 Hb_000589_320 0.1436802179 - - unnamed protein product [Vitis vinifera]
4 Hb_002204_040 0.20107034 - - hypothetical protein B456_008G181200 [Gossypium raimondii]
5 Hb_000291_130 0.2013243832 - - -
6 Hb_001579_040 0.221125234 - - -
7 Hb_094132_010 0.2313536006 - - hypothetical protein POPTR_0018s03360g [Populus trichocarpa]
8 Hb_001454_110 0.2323790741 - - hypothetical protein POPTR_0026s00250g [Populus trichocarpa]
9 Hb_005839_010 0.2342228297 - - 30S ribosomal protein s13 [Camellia sinensis]
10 Hb_163132_010 0.2373651788 - - -
11 Hb_032531_040 0.2380677011 - - E3 ISG15--protein ligase HERC5 [Gossypium arboreum]
12 Hb_007356_010 0.2414689319 - - CTV.19 [Citrus trifoliata]
13 Hb_007290_020 0.246642137 - - PREDICTED: subtilisin-like protease SBT4.14 [Jatropha curcas]
14 Hb_068804_060 0.2467858563 - - PREDICTED: ABC transporter G family member 17-like [Jatropha curcas]
15 Hb_103093_010 0.2506528106 - - PREDICTED: wall-associated receptor kinase 4-like [Elaeis guineensis]
16 Hb_000300_140 0.2524121101 transcription factor TF Family: HB Protein WUSCHEL, putative [Ricinus communis]
17 Hb_000193_030 0.2560559755 - - PREDICTED: heavy metal-associated isoprenylated plant protein 26 [Jatropha curcas]
18 Hb_002450_130 0.2653377637 - - hypothetical protein JCGZ_06565 [Jatropha curcas]
19 Hb_007188_050 0.2655982911 - - -
20 Hb_012150_050 0.271511063 - - protein binding protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_106873_010 Hb_106873_010 Hb_000671_040 Hb_000671_040 Hb_106873_010--Hb_000671_040 Hb_000589_320 Hb_000589_320 Hb_106873_010--Hb_000589_320 Hb_002204_040 Hb_002204_040 Hb_106873_010--Hb_002204_040 Hb_000291_130 Hb_000291_130 Hb_106873_010--Hb_000291_130 Hb_001579_040 Hb_001579_040 Hb_106873_010--Hb_001579_040 Hb_094132_010 Hb_094132_010 Hb_106873_010--Hb_094132_010 Hb_163132_010 Hb_163132_010 Hb_000671_040--Hb_163132_010 Hb_007356_010 Hb_007356_010 Hb_000671_040--Hb_007356_010 Hb_007290_020 Hb_007290_020 Hb_000671_040--Hb_007290_020 Hb_068804_060 Hb_068804_060 Hb_000671_040--Hb_068804_060 Hb_000300_140 Hb_000300_140 Hb_000671_040--Hb_000300_140 Hb_001454_110 Hb_001454_110 Hb_000589_320--Hb_001454_110 Hb_032531_040 Hb_032531_040 Hb_000589_320--Hb_032531_040 Hb_005839_010 Hb_005839_010 Hb_000589_320--Hb_005839_010 Hb_042026_010 Hb_042026_010 Hb_000589_320--Hb_042026_010 Hb_000962_010 Hb_000962_010 Hb_000589_320--Hb_000962_010 Hb_002204_040--Hb_000291_130 Hb_002204_040--Hb_005839_010 Hb_079978_010 Hb_079978_010 Hb_002204_040--Hb_079978_010 Hb_001385_080 Hb_001385_080 Hb_002204_040--Hb_001385_080 Hb_122567_020 Hb_122567_020 Hb_002204_040--Hb_122567_020 Hb_002450_130 Hb_002450_130 Hb_000291_130--Hb_002450_130 Hb_000291_130--Hb_001579_040 Hb_000291_130--Hb_000671_040 Hb_008096_020 Hb_008096_020 Hb_000291_130--Hb_008096_020 Hb_002972_060 Hb_002972_060 Hb_000291_130--Hb_002972_060 Hb_001579_040--Hb_001454_110 Hb_059952_010 Hb_059952_010 Hb_001579_040--Hb_059952_010 Hb_000316_090 Hb_000316_090 Hb_001579_040--Hb_000316_090 Hb_001579_040--Hb_032531_040 Hb_145827_010 Hb_145827_010 Hb_001579_040--Hb_145827_010 Hb_000193_030 Hb_000193_030 Hb_094132_010--Hb_000193_030 Hb_103093_010 Hb_103093_010 Hb_094132_010--Hb_103093_010 Hb_094132_010--Hb_163132_010 Hb_094132_010--Hb_000671_040 Hb_094132_010--Hb_007356_010 Hb_094132_010--Hb_007290_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0.30305 0 1.53884
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis