Hb_097981_010

Information

Type -
Description -
Location Contig97981: 998-1563
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_097981_010 0.0 - - -
2 Hb_001758_030 0.1337335142 - - hypothetical protein JCGZ_09181 [Jatropha curcas]
3 Hb_004678_070 0.1405410607 - - PREDICTED: putative receptor-like protein kinase At3g47110 [Jatropha curcas]
4 Hb_105123_020 0.2935232006 - - conserved hypothetical protein [Ricinus communis]
5 Hb_095399_010 0.3050969109 - - cytochrome b/f complex subunit IV [Sphagnum fimbriatum]
6 Hb_004981_010 0.3123954768 - - -
7 Hb_062317_020 0.3192677933 - - conserved hypothetical protein [Ricinus communis]
8 Hb_065395_020 0.3213595494 - - receptor-kinase, putative [Ricinus communis]
9 Hb_181402_010 0.3225835439 - - PREDICTED: uncharacterized protein LOC104905886 [Beta vulgaris subsp. vulgaris]
10 Hb_012490_110 0.3319744195 - - PREDICTED: uncharacterized membrane protein C776.05 [Jatropha curcas]
11 Hb_007595_060 0.3325142767 - - conserved hypothetical protein [Ricinus communis]
12 Hb_137338_010 0.3414765368 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance protein RGA2-like [Jatropha curcas]
13 Hb_001320_020 0.3430987869 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103696607 [Phoenix dactylifera]
14 Hb_002874_140 0.3434661873 - - PREDICTED: 26S proteasome non-ATPase regulatory subunit 11 homolog [Prunus mume]
15 Hb_034359_010 0.3503427013 - - -
16 Hb_001379_080 0.3529786769 - - PREDICTED: WAT1-related protein At5g07050-like [Vitis vinifera]
17 Hb_007520_070 0.3542069528 - - PREDICTED: uncharacterized protein LOC105155919 [Sesamum indicum]
18 Hb_003540_070 0.359440181 - - PREDICTED: uncharacterized protein LOC105179663 [Sesamum indicum]
19 Hb_004068_010 0.3613737397 - - beta-amyrin synthase [Euphorbia tirucalli]
20 Hb_008484_020 0.3626169844 - - PREDICTED: uncharacterized protein LOC104106381 [Nicotiana tomentosiformis]

Gene co-expression network

sample Hb_097981_010 Hb_097981_010 Hb_001758_030 Hb_001758_030 Hb_097981_010--Hb_001758_030 Hb_004678_070 Hb_004678_070 Hb_097981_010--Hb_004678_070 Hb_105123_020 Hb_105123_020 Hb_097981_010--Hb_105123_020 Hb_095399_010 Hb_095399_010 Hb_097981_010--Hb_095399_010 Hb_004981_010 Hb_004981_010 Hb_097981_010--Hb_004981_010 Hb_062317_020 Hb_062317_020 Hb_097981_010--Hb_062317_020 Hb_001758_030--Hb_004678_070 Hb_001758_030--Hb_004981_010 Hb_181402_010 Hb_181402_010 Hb_001758_030--Hb_181402_010 Hb_001758_030--Hb_105123_020 Hb_003717_020 Hb_003717_020 Hb_001758_030--Hb_003717_020 Hb_065395_020 Hb_065395_020 Hb_004678_070--Hb_065395_020 Hb_003540_070 Hb_003540_070 Hb_004678_070--Hb_003540_070 Hb_004678_070--Hb_004981_010 Hb_002471_280 Hb_002471_280 Hb_004678_070--Hb_002471_280 Hb_034359_010 Hb_034359_010 Hb_105123_020--Hb_034359_010 Hb_007595_060 Hb_007595_060 Hb_105123_020--Hb_007595_060 Hb_001519_230 Hb_001519_230 Hb_105123_020--Hb_001519_230 Hb_105123_020--Hb_095399_010 Hb_041476_010 Hb_041476_010 Hb_095399_010--Hb_041476_010 Hb_002224_050 Hb_002224_050 Hb_095399_010--Hb_002224_050 Hb_000541_010 Hb_000541_010 Hb_095399_010--Hb_000541_010 Hb_003245_010 Hb_003245_010 Hb_095399_010--Hb_003245_010 Hb_165958_010 Hb_165958_010 Hb_095399_010--Hb_165958_010 Hb_117252_010 Hb_117252_010 Hb_095399_010--Hb_117252_010 Hb_004981_010--Hb_003717_020 Hb_004981_010--Hb_065395_020 Hb_001021_050 Hb_001021_050 Hb_004981_010--Hb_001021_050 Hb_004981_010--Hb_181402_010 Hb_000045_060 Hb_000045_060 Hb_004981_010--Hb_000045_060 Hb_001320_020 Hb_001320_020 Hb_062317_020--Hb_001320_020 Hb_001496_050 Hb_001496_050 Hb_062317_020--Hb_001496_050 Hb_000968_070 Hb_000968_070 Hb_062317_020--Hb_000968_070 Hb_007520_070 Hb_007520_070 Hb_062317_020--Hb_007520_070 Hb_007793_030 Hb_007793_030 Hb_062317_020--Hb_007793_030 Hb_062317_020--Hb_034359_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0637122 0 0.0728325 0 0.110165
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.208964

CAGE analysis